Analysis of Ligand-Protein Contacts in PDB entry:
8Z82


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 133 ligands in PDB entry 8Z82. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEC
C
401 43HEME C
lig 2
HEC
C
402 43HEME C
lig 3
HEC
C
403 43HEME C
lig 4
HEC
C
404 43HEME C
lig 5
MG
C
405 1MAGNESIUM ION
lig 6
LJQ
C
406 31 PENTADECANOATE
lig 7
PLM
C
407 12PALMITIC ACID
lig 8
PGV
C
408 32 OCTADEC-11-ENOATE
lig 9
LMT
L
301 25DODECYL-BETA-D-MALTOSIDE
lig 10
BCL
L
302 66BACTERIOCHLOROPHYLL A
lig 11
BPH
L
303 65BACTERIOPHEOPHYTIN A
lig 12
UQ8
L
304 33UBIQUINONE-8
lig 13
PGV
L
305 43 OCTADEC-11-ENOATE
lig 14
UQ8
L
306 38UBIQUINONE-8
lig 15
UQ8
L
307 17UBIQUINONE-8
lig 16
LMT
L
308 35DODECYL-BETA-D-MALTOSIDE
lig 17
PGV
L
309 36 OCTADEC-11-ENOATE
lig 18
PGV
L
310 41 OCTADEC-11-ENOATE
lig 19
BCL
L
311 66BACTERIOCHLOROPHYLL A
lig 20
BCL
L
312 66BACTERIOCHLOROPHYLL A
lig 21
FE
M
401 1FE (III) ION
lig 22
CDL
M
402 82CARDIOLIPIN
lig 23
BCL
M
403 66BACTERIOCHLOROPHYLL A
lig 24
BPH
M
404 65BACTERIOPHEOPHYTIN A
lig 25
MQ8
M
405 53MENAQUINONE 8
lig 26
CRT
M
406 44SPIRILLOXANTHIN
lig 27
CDL
M
407 80CARDIOLIPIN
lig 28
CDL
M
408 56CARDIOLIPIN
lig 29
CDL
M
409 50CARDIOLIPIN
lig 30
PGV
M
410 51 OCTADEC-11-ENOATE
lig 31
LMT
M
411 35DODECYL-BETA-D-MALTOSIDE
lig 32
CDL
H
301 64CARDIOLIPIN
lig 33
PGV
H
302 36 OCTADEC-11-ENOATE
lig 34
CDL
H
303 75CARDIOLIPIN
lig 35
PGV
H
304 42 OCTADEC-11-ENOATE
lig 36
LMT
H
305 30DODECYL-BETA-D-MALTOSIDE
lig 37
LMT
H
306 35DODECYL-BETA-D-MALTOSIDE
lig 38
LMT
H
307 26DODECYL-BETA-D-MALTOSIDE
lig 39
BCL
A
101 66BACTERIOCHLOROPHYLL A
lig 40
CRT
B
101 44SPIRILLOXANTHIN
lig 41
BCL
B
102 66BACTERIOCHLOROPHYLL A
lig 42
PGV
B
103 44 OCTADEC-11-ENOATE
lig 43
PGV
B
104 41 OCTADEC-11-ENOATE
lig 44
BCL
D
101 66BACTERIOCHLOROPHYLL A
lig 45
BCL
D
102 66BACTERIOCHLOROPHYLL A
lig 46
BCL
E
101 66BACTERIOCHLOROPHYLL A
lig 47
PGV
E
102 38 OCTADEC-11-ENOATE
lig 48
PGV
F
101 50 OCTADEC-11-ENOATE
lig 49
LMT
F
102 33DODECYL-BETA-D-MALTOSIDE
lig 50
BCL
F
103 66BACTERIOCHLOROPHYLL A
lig 51
PGV
G
101 49 OCTADEC-11-ENOATE
lig 52
CRT
G
102 44SPIRILLOXANTHIN
lig 53
BCL
G
103 66BACTERIOCHLOROPHYLL A
lig 54
PGV
G
104 50 OCTADEC-11-ENOATE
lig 55
PGV
G
105 42 OCTADEC-11-ENOATE
lig 56
LMT
I
101 25DODECYL-BETA-D-MALTOSIDE
lig 57
BCL
I
102 66BACTERIOCHLOROPHYLL A
lig 58
BCL
I
103 66BACTERIOCHLOROPHYLL A
lig 59
BCL
J
101 66BACTERIOCHLOROPHYLL A
lig 60
PGV
J
102 33 OCTADEC-11-ENOATE
lig 61
BCL
K
101 66BACTERIOCHLOROPHYLL A
lig 62
PGV
N
101 50 OCTADEC-11-ENOATE
lig 63
CRT
N
102 44SPIRILLOXANTHIN
lig 64
BCL
N
103 66BACTERIOCHLOROPHYLL A
lig 65
PGV
N
104 47 OCTADEC-11-ENOATE
lig 66
PGV
N
105 37 OCTADEC-11-ENOATE
lig 67
CDL
O
101 73CARDIOLIPIN
lig 68
LMT
O
102 29DODECYL-BETA-D-MALTOSIDE
lig 69
BCL
O
103 66BACTERIOCHLOROPHYLL A
lig 70
BCL
O
104 66BACTERIOCHLOROPHYLL A
lig 71
BCL
P
101 66BACTERIOCHLOROPHYLL A
lig 72
PGV
P
102 47 OCTADEC-11-ENOATE
lig 73
PGV
P
103 40 OCTADEC-11-ENOATE
lig 74
LMT
Q
101 32DODECYL-BETA-D-MALTOSIDE
lig 75
BCL
Q
102 66BACTERIOCHLOROPHYLL A
lig 76
CRT
R
101 44SPIRILLOXANTHIN
lig 77
BCL
R
102 66BACTERIOCHLOROPHYLL A
lig 78
PGV
R
103 43 OCTADEC-11-ENOATE
lig 79
PGV
R
104 41 OCTADEC-11-ENOATE
lig 80
BCL
S
101 66BACTERIOCHLOROPHYLL A
lig 81
BCL
S
102 66BACTERIOCHLOROPHYLL A
lig 82
BCL
T
101 66BACTERIOCHLOROPHYLL A
lig 83
PGV
T
102 46 OCTADEC-11-ENOATE
lig 84
PGV
T
103 47 OCTADEC-11-ENOATE
lig 85
CDL
U
101 51CARDIOLIPIN
lig 86
CDL
U
102 46CARDIOLIPIN
lig 87
BCL
U
103 66BACTERIOCHLOROPHYLL A
lig 88
CRT
V
101 44SPIRILLOXANTHIN
lig 89
BCL
V
102 66BACTERIOCHLOROPHYLL A
lig 90
PGV
V
103 44 OCTADEC-11-ENOATE
lig 91
BCL
W
101 66BACTERIOCHLOROPHYLL A
lig 92
BCL
W
102 66BACTERIOCHLOROPHYLL A
lig 93
PGV
X
101 43 OCTADEC-11-ENOATE
lig 94
BCL
X
102 66BACTERIOCHLOROPHYLL A
lig 95
PGV
X
103 45 OCTADEC-11-ENOATE
lig 96
BCL
Y
401 66BACTERIOCHLOROPHYLL A
lig 97
BCL
Y
402 66BACTERIOCHLOROPHYLL A
lig 98
CRT
Y
403 44SPIRILLOXANTHIN
lig 99
PGV
Z
101 46 OCTADEC-11-ENOATE
lig 100
BCL
Z
102 66BACTERIOCHLOROPHYLL A
lig 101
PGV
Z
103 44 OCTADEC-11-ENOATE
lig 102
PGV
Z
104 43 OCTADEC-11-ENOATE
lig 103
PGV
1
101 45 OCTADEC-11-ENOATE
lig 104
BCL
1
102 66BACTERIOCHLOROPHYLL A
lig 105
BCL
1
103 66BACTERIOCHLOROPHYLL A
lig 106
BCL
2
101 66BACTERIOCHLOROPHYLL A
lig 107
PGV
2
102 46 OCTADEC-11-ENOATE
lig 108
PGV
2
103 37 OCTADEC-11-ENOATE
lig 109
PGV
3
101 30 OCTADEC-11-ENOATE
lig 110
BCL
3
102 66BACTERIOCHLOROPHYLL A
lig 111
CRT
4
101 44SPIRILLOXANTHIN
lig 112
BCL
4
102 66BACTERIOCHLOROPHYLL A
lig 113
PGV
4
103 44 OCTADEC-11-ENOATE
lig 114
LMT
5
101 35DODECYL-BETA-D-MALTOSIDE
lig 115
LMT
5
102 24DODECYL-BETA-D-MALTOSIDE
lig 116
BCL
5
103 66BACTERIOCHLOROPHYLL A
lig 117
BCL
5
104 66BACTERIOCHLOROPHYLL A
lig 118
PGV
6
101 46 OCTADEC-11-ENOATE
lig 119
BCL
6
102 66BACTERIOCHLOROPHYLL A
lig 120
PGV
6
103 44 OCTADEC-11-ENOATE
lig 121
PGV
6
104 43 OCTADEC-11-ENOATE
lig 122
LMT
7
101 25DODECYL-BETA-D-MALTOSIDE
lig 123
BCL
7
102 66BACTERIOCHLOROPHYLL A
lig 124
CRT
8
101 44SPIRILLOXANTHIN
lig 125
BCL
8
102 66BACTERIOCHLOROPHYLL A
lig 126
PGV
8
103 43 OCTADEC-11-ENOATE
lig 127
BCL
9
101 66BACTERIOCHLOROPHYLL A
lig 128
BCL
9
102 66BACTERIOCHLOROPHYLL A
lig 129
PGV
0
101 41 OCTADEC-11-ENOATE
lig 130
BCL
0
102 66BACTERIOCHLOROPHYLL A
lig 131
PGV
0
103 44 OCTADEC-11-ENOATE
lig 132
PGV
0
104 43 OCTADEC-11-ENOATE
lig 133
SF4
a
201 8IRON/SULFUR CLUSTER