Analysis of Ligand-Protein Contacts in PDB entry:
8ZEE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 70 ligands in PDB entry 8ZEE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CLA
B
601 65CHLOROPHYLL A
lig 2
CLA
B
602 65CHLOROPHYLL A
lig 3
CLA
B
603 65CHLOROPHYLL A
lig 4
CLA
B
604 65CHLOROPHYLL A
lig 5
CLA
B
605 65CHLOROPHYLL A
lig 6
CLA
B
606 65CHLOROPHYLL A
lig 7
CLA
B
607 65CHLOROPHYLL A
lig 8
CLA
B
608 65CHLOROPHYLL A
lig 9
CLA
B
609 65CHLOROPHYLL A
lig 10
CLA
B
610 65CHLOROPHYLL A
lig 11
CLA
B
611 65CHLOROPHYLL A
lig 12
CLA
B
612 65CHLOROPHYLL A
lig 13
CLA
B
613 65CHLOROPHYLL A
lig 14
CLA
B
614 45CHLOROPHYLL A
lig 15
CLA
B
615 65CHLOROPHYLL A
lig 16
CLA
B
616 65CHLOROPHYLL A
lig 17
BCR
B
617 40BETA-CAROTENE
lig 18
BCR
B
618 40BETA-CAROTENE
lig 19
BCR
B
619 40BETA-CAROTENE
lig 20
LMG
B
620 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 21
LHG
B
621 441,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 22
LHG
B
622 471,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 23
LHG
B
623 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 24
BCT
D
401 4BICARBONATE ION
lig 25
CLA
D
402 65CHLOROPHYLL A
lig 26
CLA
D
403 65CHLOROPHYLL A
lig 27
BCR
D
404 40BETA-CAROTENE
lig 28
PL9
D
405 55 BENZOQUINONE
lig 29
LHG
D
406 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 30
LHG
D
407 431,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 31
LMG
D
408 461,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 32
LHG
D
409 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 33
CLA
D
410 65CHLOROPHYLL A
lig 34
PHO
D
411 64PHEOPHYTIN A
lig 35
PHO
D
412 64PHEOPHYTIN A
lig 36
HEM
E
101 43PROTOPORPHYRIN IX CONTAINING FE
lig 37
BCR
H
101 40BETA-CAROTENE
lig 38
LMG
H
102 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 39
BCR
K
101 40BETA-CAROTENE
lig 40
LMG
K
102 511,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 41
LHG
K
103 411,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 42
LHG
L
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 43
VTQ
X
201 32RRR-ALPHA-TOCOPHERYLQUINONE
lig 44
BCR
Z
101 40BETA-CAROTENE
lig 45
LMG
C
601 491,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 46
CLA
C
602 65CHLOROPHYLL A
lig 47
CLA
C
603 65CHLOROPHYLL A
lig 48
CLA
C
604 65CHLOROPHYLL A
lig 49
CLA
C
605 65CHLOROPHYLL A
lig 50
CLA
C
606 65CHLOROPHYLL A
lig 51
CLA
C
607 65CHLOROPHYLL A
lig 52
CLA
C
608 65CHLOROPHYLL A
lig 53
CLA
C
609 65CHLOROPHYLL A
lig 54
CLA
C
610 65CHLOROPHYLL A
lig 55
CLA
C
611 65CHLOROPHYLL A
lig 56
CLA
C
612 65CHLOROPHYLL A
lig 57
CLA
C
613 65CHLOROPHYLL A
lig 58
CLA
C
614 65CHLOROPHYLL A
lig 59
BCR
C
615 40BETA-CAROTENE
lig 60
BCR
C
616 40BETA-CAROTENE
lig 61
DGD
C
617 55DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 62
DGD
C
618 57DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 63
DGD
C
619 59DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 64
SQD
C
620 51 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 65
LMG
C
621 481,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 66
FE2
A
401 1FE (II) ION
lig 67
CLA
A
402 65CHLOROPHYLL A
lig 68
CLA
A
403 49CHLOROPHYLL A
lig 69
CLA
A
404 60CHLOROPHYLL A
lig 70
BCR
A
405 40BETA-CAROTENE