Analysis of Ligand-Protein Contacts in PDB entry:
9B8O


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 74 ligands in PDB entry 9B8O. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 20
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
Z
6 11ALPHA-D-MANNOPYRANOSE
lig 23
GLC
Z
7 11ALPHA-D-GLUCOPYRANOSE
lig 24
GLC
Z
8 11ALPHA-D-GLUCOPYRANOSE
lig 25
GLC
Z
9 11ALPHA-D-GLUCOPYRANOSE
lig 26
MAN
Z
10 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
Z
11 11ALPHA-D-MANNOPYRANOSE
lig 28
PC1
P
501 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 29
WJP
a
901 34 10,14,18-TETRAEN-1-YL DIHYDROGEN DIPHOSPH
lig 30
NAG
a
902 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
LP3
a
903 35 4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE
lig 32
PC1
a
904 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
PTY
a
905 50PHOSPHATIDYLETHANOLAMINE
lig 34
PTY
a
906 50PHOSPHATIDYLETHANOLAMINE
lig 35
PC1
b
301 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 36
PC1
b
302 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 37
PTY
b
303 50PHOSPHATIDYLETHANOLAMINE
lig 38
PTY
b
304 50PHOSPHATIDYLETHANOLAMINE
lig 39
CLR
b
305 28CHOLESTEROL
lig 40
PTY
e
101 50PHOSPHATIDYLETHANOLAMINE
lig 41
CLR
h
201 28CHOLESTEROL
lig 42
CLR
h
202 28CHOLESTEROL
lig 43
CLR
i
201 28CHOLESTEROL
lig 44
CLR
i
202 28CHOLESTEROL
lig 45
CLR
i
203 28CHOLESTEROL
lig 46
CLR
i
204 28CHOLESTEROL
lig 47
PTY
j
201 50PHOSPHATIDYLETHANOLAMINE
lig 48
CLR
j
202 28CHOLESTEROL
lig 49
CLR
j
203 28CHOLESTEROL
lig 50
CLR
j
204 28CHOLESTEROL
lig 51
CLR
j
205 28CHOLESTEROL
lig 52
CLR
k
201 28CHOLESTEROL
lig 53
CLR
k
202 28CHOLESTEROL
lig 54
CLR
k
203 28CHOLESTEROL
lig 55
CLR
k
204 28CHOLESTEROL
lig 56
PC1
l
201 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 57
CLR
l
202 28CHOLESTEROL
lig 58
CLR
l
203 28CHOLESTEROL
lig 59
CLR
l
204 28CHOLESTEROL
lig 60
CLR
m
201 28CHOLESTEROL
lig 61
CLR
m
202 28CHOLESTEROL
lig 62
CLR
m
203 28CHOLESTEROL
lig 63
CLR
m
204 28CHOLESTEROL
lig 64
CLR
m
205 28CHOLESTEROL
lig 65
CLR
n
201 28CHOLESTEROL
lig 66
CLR
n
202 28CHOLESTEROL
lig 67
CLR
n
203 28CHOLESTEROL
lig 68
CLR
n
204 28CHOLESTEROL
lig 69
CLR
o
201 28CHOLESTEROL
lig 70
CLR
o
202 28CHOLESTEROL
lig 71
CLR
o
203 28CHOLESTEROL
lig 72
PTY
p
401 50PHOSPHATIDYLETHANOLAMINE
lig 73
PTY
p
402 50PHOSPHATIDYLETHANOLAMINE
lig 74
PTY
p
403 50PHOSPHATIDYLETHANOLAMINE