Analysis of Ligand-Protein Contacts in PDB entry:
9D1J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 6 ligands in PDB entry 9D1J. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MLY
A
155 11N-DIMETHYL-LYSINE
lig 2
MLY
A
156 11N-DIMETHYL-LYSINE
lig 3
SEP
A
218 10PHOSPHOSERINE
lig 4
MLY
A
485 11N-DIMETHYL-LYSINE
lig 5
MLZ
A
555 10N-METHYL-LYSINE
lig 6
MLY
A
565 11N-DIMETHYL-LYSINE