Analysis of Ligand-Protein Contacts in PDB entry:
9D1L


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 9D1L. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MLZ
A
10 10N-METHYL-LYSINE
lig 2
MLY
A
16 11N-DIMETHYL-LYSINE
lig 3
MLY
A
41 11N-DIMETHYL-LYSINE
lig 4
MLY
A
46 11N-DIMETHYL-LYSINE
lig 5
MLY
A
74 11N-DIMETHYL-LYSINE
lig 6
MLZ
A
92 10N-METHYL-LYSINE
lig 7
MLY
A
126 11N-DIMETHYL-LYSINE
lig 8
M3L
A
155 12N-TRIMETHYLLYSINE
lig 9
M3L
A
156 12N-TRIMETHYLLYSINE
lig 10
MLZ
A
199 10N-METHYL-LYSINE
lig 11
MLZ
A
306 10N-METHYL-LYSINE
lig 12
MLZ
A
334 10N-METHYL-LYSINE
lig 13
MLY
A
360 11N-DIMETHYL-LYSINE
lig 14
MLY
A
396 11N-DIMETHYL-LYSINE
lig 15
MLY
A
398 11N-DIMETHYL-LYSINE
lig 16
MLY
A
467 11N-DIMETHYL-LYSINE
lig 17
MLY
A
495 11N-DIMETHYL-LYSINE
lig 18
M3L
A
537 12N-TRIMETHYLLYSINE
lig 19
MLY
A
555 11N-DIMETHYL-LYSINE
lig 20
MLY
A
557 11N-DIMETHYL-LYSINE
lig 21
MLY
A
565 11N-DIMETHYL-LYSINE
lig 22
EDO
A
601 41,2-ETHANEDIOL
lig 23
ACT
A
602 4ACETATE ION
lig 24
EDO
A
603 41,2-ETHANEDIOL
lig 25
EDO
A
604 41,2-ETHANEDIOL
lig 26
EDO
A
605 41,2-ETHANEDIOL
lig 27
MPD
A
606 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 28
MPD
A
607 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 29
EDO
A
608 41,2-ETHANEDIOL
lig 30
PEG
A
609 7DI(HYDROXYETHYL)ETHER
lig 31
EDO
A
610 41,2-ETHANEDIOL
lig 32
MPD
A
611 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 33
PEG
A
612 7DI(HYDROXYETHYL)ETHER
lig 34
BTB
A
613 14 PROPANE-1,3-DIOL
lig 35
EDO
A
614 41,2-ETHANEDIOL
lig 36
EDO
A
615 41,2-ETHANEDIOL
lig 37
EDO
A
616 41,2-ETHANEDIOL
lig 38
PEG
A
617 7DI(HYDROXYETHYL)ETHER
lig 39
EDO
A
618 41,2-ETHANEDIOL