Analysis of Ligand-Protein Contacts in PDB entry:
9D1Q


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 9D1Q. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MLZ
A
10 10N-METHYL-LYSINE
lig 2
MLY
A
16 11N-DIMETHYL-LYSINE
lig 3
MLY
A
41 11N-DIMETHYL-LYSINE
lig 4
MLY
A
43 11N-DIMETHYL-LYSINE
lig 5
MLY
A
46 11N-DIMETHYL-LYSINE
lig 6
MLY
A
74 11N-DIMETHYL-LYSINE
lig 7
MLZ
A
92 10N-METHYL-LYSINE
lig 8
MLY
A
126 11N-DIMETHYL-LYSINE
lig 9
M3L
A
155 12N-TRIMETHYLLYSINE
lig 10
MLZ
A
199 10N-METHYL-LYSINE
lig 11
MLZ
A
334 10N-METHYL-LYSINE
lig 12
MLY
A
360 11N-DIMETHYL-LYSINE
lig 13
MLY
A
396 11N-DIMETHYL-LYSINE
lig 14
MLY
A
398 11N-DIMETHYL-LYSINE
lig 15
MLY
A
467 11N-DIMETHYL-LYSINE
lig 16
MLY
A
495 11N-DIMETHYL-LYSINE
lig 17
MLY
A
555 11N-DIMETHYL-LYSINE
lig 18
MLY
A
557 11N-DIMETHYL-LYSINE
lig 19
MLY
A
565 11N-DIMETHYL-LYSINE
lig 20
EDO
A
601 41,2-ETHANEDIOL
lig 21
MPD
A
602 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 22
MPD
A
603 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 23
MPD
A
604 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 24
EDO
A
605 41,2-ETHANEDIOL
lig 25
EDO
A
606 41,2-ETHANEDIOL
lig 26
PEG
A
607 7DI(HYDROXYETHYL)ETHER