Analysis of Ligand-Protein Contacts in PDB entry:
9E3M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 55 ligands in PDB entry 9E3M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
GDP
A
701 28GUANOSINE-5'-DIPHOSPHATE
lig 14
ZN
A
702 1ZINC ION
lig 15
ZN
A
703 1ZINC ION
lig 16
NAG
A
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
Y01
A
706 35CHOLESTEROL HEMISUCCINATE
lig 19
Y01
A
707 35CHOLESTEROL HEMISUCCINATE
lig 20
PLM
A
708 14PALMITIC ACID
lig 21
PLM
A
709 17PALMITIC ACID
lig 22
PLM
A
710 15PALMITIC ACID
lig 23
PLM
A
711 6PALMITIC ACID
lig 24
PLM
A
712 6PALMITIC ACID
lig 25
PLM
A
713 8PALMITIC ACID
lig 26
PLM
A
714 17PALMITIC ACID
lig 27
NA
A
715 1SODIUM ION
lig 28
GDP
C
701 28GUANOSINE-5'-DIPHOSPHATE
lig 29
ZN
C
702 1ZINC ION
lig 30
ZN
C
703 1ZINC ION
lig 31
NAG
C
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
C
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
Y01
C
706 35CHOLESTEROL HEMISUCCINATE
lig 34
Y01
C
707 35CHOLESTEROL HEMISUCCINATE
lig 35
PLM
C
708 14PALMITIC ACID
lig 36
PLM
C
709 17PALMITIC ACID
lig 37
PLM
C
710 15PALMITIC ACID
lig 38
PLM
C
711 6PALMITIC ACID
lig 39
PLM
C
712 6PALMITIC ACID
lig 40
PLM
C
713 8PALMITIC ACID
lig 41
PLM
C
714 17PALMITIC ACID
lig 42
GDP
B
701 28GUANOSINE-5'-DIPHOSPHATE
lig 43
ZN
B
702 1ZINC ION
lig 44
ZN
B
703 1ZINC ION
lig 45
NAG
B
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
B
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
Y01
B
706 35CHOLESTEROL HEMISUCCINATE
lig 48
Y01
B
707 35CHOLESTEROL HEMISUCCINATE
lig 49
PLM
B
708 14PALMITIC ACID
lig 50
PLM
B
709 17PALMITIC ACID
lig 51
PLM
B
710 15PALMITIC ACID
lig 52
PLM
B
711 6PALMITIC ACID
lig 53
PLM
B
712 6PALMITIC ACID
lig 54
PLM
B
713 8PALMITIC ACID
lig 55
PLM
B
714 17PALMITIC ACID