Analysis of Ligand-Protein Contacts in PDB entry:
9EK8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 63 ligands in PDB entry 9EK8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CXM
A
1 11N-CARBOXYMETHIONINE
lig 2
CXM
C
1 11N-CARBOXYMETHIONINE
lig 3
CXM
E
1 11N-CARBOXYMETHIONINE
lig 4
CXM
G
1 11N-CARBOXYMETHIONINE
lig 5
CXM
I
1 11N-CARBOXYMETHIONINE
lig 6
CXM
K
1 11N-CARBOXYMETHIONINE
lig 7
CXM
M
1 11N-CARBOXYMETHIONINE
lig 8
CXM
O
1 11N-CARBOXYMETHIONINE
lig 9
CXM
Q
1 11N-CARBOXYMETHIONINE
lig 10
BCL
A
301 66BACTERIOCHLOROPHYLL A
lig 11
BCL
A
302 66BACTERIOCHLOROPHYLL A
lig 12
LDA
A
303 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 13
LMT
A
304 35DODECYL-BETA-D-MALTOSIDE
lig 14
BCL
B
101 66BACTERIOCHLOROPHYLL A
lig 15
IRM
B
102 411,2-DIHYDRO-PSI,PSI-CAROTEN-1-OL
lig 16
BCL
C
301 66BACTERIOCHLOROPHYLL A
lig 17
BCL
C
302 66BACTERIOCHLOROPHYLL A
lig 18
LDA
C
303 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 19
LMT
D
101 35DODECYL-BETA-D-MALTOSIDE
lig 20
BCL
D
102 66BACTERIOCHLOROPHYLL A
lig 21
IRM
D
103 411,2-DIHYDRO-PSI,PSI-CAROTEN-1-OL
lig 22
BCL
E
301 66BACTERIOCHLOROPHYLL A
lig 23
BCL
E
302 66BACTERIOCHLOROPHYLL A
lig 24
LDA
E
303 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 25
IRM
E
304 411,2-DIHYDRO-PSI,PSI-CAROTEN-1-OL
lig 26
BCL
F
101 66BACTERIOCHLOROPHYLL A
lig 27
LMT
F
102 35DODECYL-BETA-D-MALTOSIDE
lig 28
BCL
G
301 66BACTERIOCHLOROPHYLL A
lig 29
BCL
G
302 66BACTERIOCHLOROPHYLL A
lig 30
LDA
G
303 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 31
LMT
H
101 35DODECYL-BETA-D-MALTOSIDE
lig 32
BCL
H
102 66BACTERIOCHLOROPHYLL A
lig 33
IRM
H
103 411,2-DIHYDRO-PSI,PSI-CAROTEN-1-OL
lig 34
BCL
I
301 66BACTERIOCHLOROPHYLL A
lig 35
BCL
I
302 66BACTERIOCHLOROPHYLL A
lig 36
LMT
I
303 35DODECYL-BETA-D-MALTOSIDE
lig 37
LDA
I
304 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 38
BCL
J
101 66BACTERIOCHLOROPHYLL A
lig 39
IRM
J
102 411,2-DIHYDRO-PSI,PSI-CAROTEN-1-OL
lig 40
BCL
K
301 66BACTERIOCHLOROPHYLL A
lig 41
BCL
K
302 66BACTERIOCHLOROPHYLL A
lig 42
LDA
K
303 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 43
LMT
L
101 35DODECYL-BETA-D-MALTOSIDE
lig 44
BCL
L
102 66BACTERIOCHLOROPHYLL A
lig 45
IRM
L
103 411,2-DIHYDRO-PSI,PSI-CAROTEN-1-OL
lig 46
BCL
M
301 66BACTERIOCHLOROPHYLL A
lig 47
BCL
M
302 66BACTERIOCHLOROPHYLL A
lig 48
LDA
M
303 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 49
BCL
N
101 66BACTERIOCHLOROPHYLL A
lig 50
IRM
N
102 411,2-DIHYDRO-PSI,PSI-CAROTEN-1-OL
lig 51
LMT
N
103 35DODECYL-BETA-D-MALTOSIDE
lig 52
BCL
O
301 66BACTERIOCHLOROPHYLL A
lig 53
BCL
O
302 66BACTERIOCHLOROPHYLL A
lig 54
LDA
O
303 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 55
BCL
P
101 66BACTERIOCHLOROPHYLL A
lig 56
IRM
P
102 411,2-DIHYDRO-PSI,PSI-CAROTEN-1-OL
lig 57
LMT
P
103 35DODECYL-BETA-D-MALTOSIDE
lig 58
BCL
Q
301 66BACTERIOCHLOROPHYLL A
lig 59
BCL
Q
302 66BACTERIOCHLOROPHYLL A
lig 60
LDA
Q
303 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 61
LMT
R
101 35DODECYL-BETA-D-MALTOSIDE
lig 62
BCL
R
102 66BACTERIOCHLOROPHYLL A
lig 63
IRM
R
103 411,2-DIHYDRO-PSI,PSI-CAROTEN-1-OL