Analysis of Ligand-Protein Contacts in PDB entry:
9FAQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 55 ligands in PDB entry 9FAQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
P1L
C
380 23S-PALMITOYL-L-CYSTEINE
lig 2
P1L
C
381 23S-PALMITOYL-L-CYSTEINE
lig 3
P1L
C
385 23S-PALMITOYL-L-CYSTEINE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
10 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
I
6 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 23
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
M
6 11ALPHA-D-MANNOPYRANOSE
lig 33
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 36
PIO
A
3901 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 37
PGW
A
3902 51 OCTADEC-9-ENOATE
lig 38
D10
B
501 10DECANE
lig 39
PGW
B
502 51 OCTADEC-9-ENOATE
lig 40
NAG
C
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
PLM
C
502 14PALMITIC ACID
lig 42
CLR
C
503 28CHOLESTEROL
lig 43
PLM
C
504 18PALMITIC ACID
lig 44
PLM
C
505 18PALMITIC ACID
lig 45
PLM
C
506 18PALMITIC ACID
lig 46
PX2
D
501 361,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE
lig 47
PIO
D
502 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 48
HEX
D
503 6HEXANE
lig 49
PGW
D
504 51 OCTADEC-9-ENOATE
lig 50
HEX
D
505 6HEXANE
lig 51
PGW
D
506 32 OCTADEC-9-ENOATE
lig 52
PLM
E
4401 18PALMITIC ACID
lig 53
D10
L
1001 10DECANE
lig 54
PGW
L
1002 51 OCTADEC-9-ENOATE
lig 55
CL
L
1003 1CHLORIDE ION