Analysis of Ligand-Protein Contacts in PDB entry:
9HRA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 76 ligands in PDB entry 9HRA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SIN
A
301 8SUCCINIC ACID
lig 2
PYR
A
302 6PYRUVIC ACID
lig 3
EDO
A
303 41,2-ETHANEDIOL
lig 4
EDO
A
304 41,2-ETHANEDIOL
lig 5
EDO
A
305 41,2-ETHANEDIOL
lig 6
MG
A
306 1MAGNESIUM ION
lig 7
CL
A
307 1CHLORIDE ION
lig 8
CL
A
308 1CHLORIDE ION
lig 9
SIN
B
301 8SUCCINIC ACID
lig 10
PYR
B
302 6PYRUVIC ACID
lig 11
DMS
B
303 4DIMETHYL SULFOXIDE
lig 12
EDO
B
304 41,2-ETHANEDIOL
lig 13
EDO
B
305 41,2-ETHANEDIOL
lig 14
EDO
B
306 41,2-ETHANEDIOL
lig 15
MG
B
307 1MAGNESIUM ION
lig 16
CL
B
308 1CHLORIDE ION
lig 17
CL
B
309 1CHLORIDE ION
lig 18
CL
B
310 1CHLORIDE ION
lig 19
SIN
D
301 8SUCCINIC ACID
lig 20
PYR
D
302 6PYRUVIC ACID
lig 21
EDO
D
303 41,2-ETHANEDIOL
lig 22
MG
D
304 1MAGNESIUM ION
lig 23
CL
D
305 1CHLORIDE ION
lig 24
CL
D
306 1CHLORIDE ION
lig 25
CL
D
307 1CHLORIDE ION
lig 26
DMS
F
301 4DIMETHYL SULFOXIDE
lig 27
SIN
F
302 8SUCCINIC ACID
lig 28
PYR
F
303 6PYRUVIC ACID
lig 29
EDO
F
304 41,2-ETHANEDIOL
lig 30
EDO
F
305 41,2-ETHANEDIOL
lig 31
EDO
F
306 41,2-ETHANEDIOL
lig 32
EDO
F
307 41,2-ETHANEDIOL
lig 33
MG
F
308 1MAGNESIUM ION
lig 34
CL
F
309 1CHLORIDE ION
lig 35
CL
F
310 1CHLORIDE ION
lig 36
CL
F
311 1CHLORIDE ION
lig 37
CL
F
312 1CHLORIDE ION
lig 38
SIN
G
301 8SUCCINIC ACID
lig 39
PYR
G
302 6PYRUVIC ACID
lig 40
EDO
G
303 41,2-ETHANEDIOL
lig 41
PGE
G
304 10TRIETHYLENE GLYCOL
lig 42
EDO
G
305 41,2-ETHANEDIOL
lig 43
EDO
G
306 41,2-ETHANEDIOL
lig 44
EDO
G
307 41,2-ETHANEDIOL
lig 45
MG
G
308 1MAGNESIUM ION
lig 46
CL
G
309 1CHLORIDE ION
lig 47
CL
G
310 1CHLORIDE ION
lig 48
CL
G
311 1CHLORIDE ION
lig 49
CL
G
312 1CHLORIDE ION
lig 50
CL
G
313 1CHLORIDE ION
lig 51
SIN
I
301 8SUCCINIC ACID
lig 52
PYR
I
302 6PYRUVIC ACID
lig 53
EDO
I
303 41,2-ETHANEDIOL
lig 54
EDO
I
304 41,2-ETHANEDIOL
lig 55
EDO
I
305 41,2-ETHANEDIOL
lig 56
MG
I
306 1MAGNESIUM ION
lig 57
CL
I
307 1CHLORIDE ION
lig 58
CL
I
308 1CHLORIDE ION
lig 59
SIN
J
301 8SUCCINIC ACID
lig 60
PYR
J
302 6PYRUVIC ACID
lig 61
PEG
J
303 7DI(HYDROXYETHYL)ETHER
lig 62
EDO
J
304 41,2-ETHANEDIOL
lig 63
EDO
J
305 41,2-ETHANEDIOL
lig 64
EDO
J
306 41,2-ETHANEDIOL
lig 65
MG
J
307 1MAGNESIUM ION
lig 66
CL
J
308 1CHLORIDE ION
lig 67
CL
J
309 1CHLORIDE ION
lig 68
SIN
L
301 8SUCCINIC ACID
lig 69
PYR
L
302 6PYRUVIC ACID
lig 70
PEG
L
303 7DI(HYDROXYETHYL)ETHER
lig 71
EDO
L
304 41,2-ETHANEDIOL
lig 72
EDO
L
305 41,2-ETHANEDIOL
lig 73
EDO
L
306 41,2-ETHANEDIOL
lig 74
MG
L
307 1MAGNESIUM ION
lig 75
CL
L
308 1CHLORIDE ION
lig 76
CL
L
309 1CHLORIDE ION