Analysis of Ligand-Protein Contacts in PDB entry:
9KDQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 9KDQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DVA
M
2 7D-VALINE
lig 2
SAR
M
4 5SARCOSINE
lig 3
MVA
M
5 8N-METHYLVALINE
lig 4
PXZ
M
6 22 PHENOXAZIN-3-ONE
lig 5
DVA
M
8 7D-VALINE
lig 6
SAR
M
10 5SARCOSINE
lig 7
MVA
M
11 8N-METHYLVALINE
lig 8
DVA
O
2 7D-VALINE
lig 9
SAR
O
4 5SARCOSINE
lig 10
MVA
O
5 8N-METHYLVALINE
lig 11
PXZ
O
6 22 PHENOXAZIN-3-ONE
lig 12
DVA
O
8 7D-VALINE
lig 13
SAR
O
10 5SARCOSINE
lig 14
MVA
O
11 8N-METHYLVALINE
lig 15
DVA
Q
2 7D-VALINE
lig 16
SAR
Q
4 5SARCOSINE
lig 17
MVA
Q
5 8N-METHYLVALINE
lig 18
PXZ
Q
6 22 PHENOXAZIN-3-ONE
lig 19
DVA
Q
8 7D-VALINE
lig 20
SAR
Q
10 5SARCOSINE
lig 21
MVA
Q
11 8N-METHYLVALINE
lig 22
ZN
A
1801 1ZINC ION
lig 23
ZN
A
1802 1ZINC ION
lig 24
MG
A
1803 1MAGNESIUM ION
lig 25
ZN
B
1301 1ZINC ION
lig 26
ZN
C
401 1ZINC ION
lig 27
ZN
I
201 1ZINC ION
lig 28
ZN
I
202 1ZINC ION
lig 29
ZN
J
101 1ZINC ION
lig 30
ZN
L
101 1ZINC ION