Analysis of Ligand-Protein Contacts in PDB entry:
9MH1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 270 ligands in PDB entry 9MH1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CHL
1
601 47CHLOROPHYLL B
lig 2
CLA
1
602 55CHLOROPHYLL A
lig 3
CLA
1
603 55CHLOROPHYLL A
lig 4
CLA
1
604 50CHLOROPHYLL A
lig 5
CLA
1
605 45CHLOROPHYLL A
lig 6
CHL
1
606 47CHLOROPHYLL B
lig 7
CLA
1
607 50CHLOROPHYLL A
lig 8
CLA
1
608 46CHLOROPHYLL A
lig 9
CLA
1
609 55CHLOROPHYLL A
lig 10
CLA
1
610 46CHLOROPHYLL A
lig 11
CLA
1
611 46CHLOROPHYLL A
lig 12
CLA
1
612 60CHLOROPHYLL A
lig 13
CLA
1
613 50CHLOROPHYLL A
lig 14
CLA
1
614 46CHLOROPHYLL A
lig 15
LUT
1
615 42 CAROTENE-3,3'-DIOL
lig 16
XAT
1
616 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 17
BCR
1
617 40BETA-CAROTENE
lig 18
LHG
1
618 261,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 19
SQD
1
619 38 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 20
LHG
1
620 461,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 21
CHL
3
301 62CHLOROPHYLL B
lig 22
CLA
3
302 65CHLOROPHYLL A
lig 23
CLA
3
303 46CHLOROPHYLL A
lig 24
CLA
3
304 46CHLOROPHYLL A
lig 25
CLA
3
305 50CHLOROPHYLL A
lig 26
CLA
3
306 51CHLOROPHYLL A
lig 27
CLA
3
307 65CHLOROPHYLL A
lig 28
CLA
3
308 55CHLOROPHYLL A
lig 29
CLA
3
309 46CHLOROPHYLL A
lig 30
CLA
3
310 46CHLOROPHYLL A
lig 31
CLA
3
311 55CHLOROPHYLL A
lig 32
CLA
3
312 46CHLOROPHYLL A
lig 33
CLA
3
313 42CHLOROPHYLL A
lig 34
CLA
3
314 46CHLOROPHYLL A
lig 35
LUT
3
315 42 CAROTENE-3,3'-DIOL
lig 36
XAT
3
316 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 37
BCR
3
317 40BETA-CAROTENE
lig 38
BCR
3
318 40BETA-CAROTENE
lig 39
BCR
3
319 40BETA-CAROTENE
lig 40
SQD
3
320 35 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 41
PTY
3
321 50PHOSPHATIDYLETHANOLAMINE
lig 42
SQD
3
322 41 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 43
CHL
3
323 61CHLOROPHYLL B
lig 44
CLA
3
324 55CHLOROPHYLL A
lig 45
CLA
3
325 55CHLOROPHYLL A
lig 46
LMG
7
301 501,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 47
PTY
7
302 15PHOSPHATIDYLETHANOLAMINE
lig 48
CLA
7
303 60CHLOROPHYLL A
lig 49
CLA
7
304 55CHLOROPHYLL A
lig 50
CLA
7
305 50CHLOROPHYLL A
lig 51
CHL
7
306 46CHLOROPHYLL B
lig 52
CHL
7
307 47CHLOROPHYLL B
lig 53
CHL
7
308 48CHLOROPHYLL B
lig 54
CLA
7
309 46CHLOROPHYLL A
lig 55
CLA
7
310 65CHLOROPHYLL A
lig 56
CLA
7
311 60CHLOROPHYLL A
lig 57
CLA
7
312 52CHLOROPHYLL A
lig 58
CLA
7
313 65CHLOROPHYLL A
lig 59
CLA
7
314 50CHLOROPHYLL A
lig 60
CLA
7
315 45CHLOROPHYLL A
lig 61
LUT
7
316 42 CAROTENE-3,3'-DIOL
lig 62
XAT
7
317 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 63
BCR
7
318 40BETA-CAROTENE
lig 64
LHG
7
319 221,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 65
LHG
7
320 341,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 66
DGD
7
321 39DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 67
SQD
7
322 39 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 68
CLA
7
323 47CHLOROPHYLL A
lig 69
LMG
7
324 301,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 70
LMU
7
325 32DODECYL-ALPHA-D-MALTOSIDE
lig 71
CLA
8
301 60CHLOROPHYLL A
lig 72
CLA
8
302 65CHLOROPHYLL A
lig 73
CLA
8
303 65CHLOROPHYLL A
lig 74
CHL
8
304 47CHLOROPHYLL B
lig 75
CHL
8
305 47CHLOROPHYLL B
lig 76
CHL
8
306 51CHLOROPHYLL B
lig 77
CLA
8
307 47CHLOROPHYLL A
lig 78
CLA
8
308 60CHLOROPHYLL A
lig 79
CLA
8
309 60CHLOROPHYLL A
lig 80
CLA
8
310 46CHLOROPHYLL A
lig 81
CLA
8
311 65CHLOROPHYLL A
lig 82
CLA
8
312 46CHLOROPHYLL A
lig 83
CLA
8
313 46CHLOROPHYLL A
lig 84
LUT
8
314 42 CAROTENE-3,3'-DIOL
lig 85
XAT
8
315 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 86
BCR
8
316 40BETA-CAROTENE
lig 87
LHG
8
317 291,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 88
LMU
8
318 33DODECYL-ALPHA-D-MALTOSIDE
lig 89
LHG
8
319 381,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 90
LHG
8
320 431,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 91
CLA
8
321 46CHLOROPHYLL A
lig 92
LMU
8
322 35DODECYL-ALPHA-D-MALTOSIDE
lig 93
CLA
9
601 46CHLOROPHYLL A
lig 94
CLA
9
602 60CHLOROPHYLL A
lig 95
CLA
9
603 55CHLOROPHYLL A
lig 96
CLA
9
604 50CHLOROPHYLL A
lig 97
CLA
9
605 45CHLOROPHYLL A
lig 98
CHL
9
606 47CHLOROPHYLL B
lig 99
CLA
9
607 60CHLOROPHYLL A
lig 100
CLA
9
608 50CHLOROPHYLL A
lig 101
CLA
9
609 46CHLOROPHYLL A
lig 102
CLA
9
610 50CHLOROPHYLL A
lig 103
CLA
9
611 55CHLOROPHYLL A
lig 104
CLA
9
612 46CHLOROPHYLL A
lig 105
LUT
9
613 42 CAROTENE-3,3'-DIOL
lig 106
XAT
9
614 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 107
XAT
9
615 44 TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
lig 108
LMU
9
616 29DODECYL-ALPHA-D-MALTOSIDE
lig 109
LHG
9
617 361,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 110
LMG
A
5001 321,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 111
LHG
A
5002 361,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 112
CL0
A
5003 65CHLOROPHYLL A ISOMER
lig 113
CLA
A
5004 65CHLOROPHYLL A
lig 114
CLA
A
5005 65CHLOROPHYLL A
lig 115
CLA
A
5006 65CHLOROPHYLL A
lig 116
CLA
A
5007 65CHLOROPHYLL A
lig 117
CLA
A
5008 65CHLOROPHYLL A
lig 118
CLA
A
5009 65CHLOROPHYLL A
lig 119
CLA
A
5010 51CHLOROPHYLL A
lig 120
CLA
A
5011 65CHLOROPHYLL A
lig 121
CLA
A
5012 65CHLOROPHYLL A
lig 122
CLA
A
5013 65CHLOROPHYLL A
lig 123
CLA
A
5014 65CHLOROPHYLL A
lig 124
CLA
A
5015 55CHLOROPHYLL A
lig 125
CLA
A
5016 65CHLOROPHYLL A
lig 126
CLA
A
5017 55CHLOROPHYLL A
lig 127
CLA
A
5018 60CHLOROPHYLL A
lig 128
CLA
A
5019 55CHLOROPHYLL A
lig 129
CLA
A
5020 65CHLOROPHYLL A
lig 130
CLA
A
5021 50CHLOROPHYLL A
lig 131
CLA
A
5022 65CHLOROPHYLL A
lig 132
CLA
A
5023 50CHLOROPHYLL A
lig 133
CLA
A
5024 60CHLOROPHYLL A
lig 134
CLA
A
5025 60CHLOROPHYLL A
lig 135
CLA
A
5026 65CHLOROPHYLL A
lig 136
CLA
A
5027 56CHLOROPHYLL A
lig 137
CLA
A
5028 65CHLOROPHYLL A
lig 138
CLA
A
5029 65CHLOROPHYLL A
lig 139
CLA
A
5030 65CHLOROPHYLL A
lig 140
CLA
A
5031 65CHLOROPHYLL A
lig 141
CLA
A
5032 50CHLOROPHYLL A
lig 142
CLA
A
5033 55CHLOROPHYLL A
lig 143
CLA
A
5034 65CHLOROPHYLL A
lig 144
CLA
A
5035 65CHLOROPHYLL A
lig 145
CLA
A
5036 64CHLOROPHYLL A
lig 146
CLA
A
5037 50CHLOROPHYLL A
lig 147
CLA
A
5038 50CHLOROPHYLL A
lig 148
CLA
A
5039 55CHLOROPHYLL A
lig 149
CLA
A
5040 60CHLOROPHYLL A
lig 150
CLA
A
5041 65CHLOROPHYLL A
lig 151
CLA
A
5042 60CHLOROPHYLL A
lig 152
CLA
A
5043 49CHLOROPHYLL A
lig 153
CLA
A
5044 65CHLOROPHYLL A
lig 154
PQN
A
5045 33PHYLLOQUINONE
lig 155
SF4
A
5046 8IRON/SULFUR CLUSTER
lig 156
BCR
A
5047 40BETA-CAROTENE
lig 157
BCR
A
5048 40BETA-CAROTENE
lig 158
BCR
A
5049 40BETA-CAROTENE
lig 159
BCR
A
5050 40BETA-CAROTENE
lig 160
BCR
A
5051 40BETA-CAROTENE
lig 161
LHG
A
5052 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 162
LMU
A
5053 35DODECYL-ALPHA-D-MALTOSIDE
lig 163
LHG
A
5054 281,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 164
LHG
A
5055 341,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 165
LHG
B
801 321,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 166
PTY
B
802 27PHOSPHATIDYLETHANOLAMINE
lig 167
BCR
B
803 40BETA-CAROTENE
lig 168
CLA
B
804 65CHLOROPHYLL A
lig 169
CLA
B
805 65CHLOROPHYLL A
lig 170
CLA
B
806 48CHLOROPHYLL A
lig 171
CLA
B
807 65CHLOROPHYLL A
lig 172
CLA
B
808 65CHLOROPHYLL A
lig 173
CLA
B
809 65CHLOROPHYLL A
lig 174
CLA
B
810 65CHLOROPHYLL A
lig 175
CLA
B
811 65CHLOROPHYLL A
lig 176
CLA
B
812 55CHLOROPHYLL A
lig 177
CLA
B
813 46CHLOROPHYLL A
lig 178
CLA
B
814 65CHLOROPHYLL A
lig 179
CLA
B
815 65CHLOROPHYLL A
lig 180
CLA
B
816 55CHLOROPHYLL A
lig 181
CLA
B
817 60CHLOROPHYLL A
lig 182
CLA
B
818 65CHLOROPHYLL A
lig 183
CLA
B
819 65CHLOROPHYLL A
lig 184
CLA
B
820 65CHLOROPHYLL A
lig 185
CLA
B
821 55CHLOROPHYLL A
lig 186
CLA
B
822 65CHLOROPHYLL A
lig 187
CLA
B
823 55CHLOROPHYLL A
lig 188
CLA
B
824 65CHLOROPHYLL A
lig 189
CLA
B
825 65CHLOROPHYLL A
lig 190
CLA
B
826 65CHLOROPHYLL A
lig 191
CLA
B
827 65CHLOROPHYLL A
lig 192
CLA
B
828 65CHLOROPHYLL A
lig 193
CLA
B
829 65CHLOROPHYLL A
lig 194
CLA
B
830 65CHLOROPHYLL A
lig 195
CLA
B
831 60CHLOROPHYLL A
lig 196
CLA
B
832 65CHLOROPHYLL A
lig 197
CLA
B
833 60CHLOROPHYLL A
lig 198
CLA
B
834 50CHLOROPHYLL A
lig 199
CLA
B
835 51CHLOROPHYLL A
lig 200
CLA
B
836 60CHLOROPHYLL A
lig 201
CLA
B
837 55CHLOROPHYLL A
lig 202
CLA
B
838 55CHLOROPHYLL A
lig 203
CLA
B
839 65CHLOROPHYLL A
lig 204
CLA
B
840 65CHLOROPHYLL A
lig 205
PQN
B
841 33PHYLLOQUINONE
lig 206
BCR
B
842 40BETA-CAROTENE
lig 207
BCR
B
843 40BETA-CAROTENE
lig 208
BCR
B
844 40BETA-CAROTENE
lig 209
BCR
B
845 39BETA-CAROTENE
lig 210
BCR
B
846 40BETA-CAROTENE
lig 211
BCR
B
847 40BETA-CAROTENE
lig 212
DGD
B
848 61DIGALACTOSYL DIACYL GLYCEROL (DGDG)
lig 213
LHG
B
849 301,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 214
SQD
B
850 31 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 215
SF4
C
101 8IRON/SULFUR CLUSTER
lig 216
SF4
C
102 8IRON/SULFUR CLUSTER
lig 217
PTY
F
301 29PHOSPHATIDYLETHANOLAMINE
lig 218
PTY
F
302 32PHOSPHATIDYLETHANOLAMINE
lig 219
CLA
F
303 65CHLOROPHYLL A
lig 220
BCR
F
304 40BETA-CAROTENE
lig 221
LMU
F
305 32DODECYL-ALPHA-D-MALTOSIDE
lig 222
CLA
F
306 60CHLOROPHYLL A
lig 223
CLA
F
307 47CHLOROPHYLL A
lig 224
CLA
F
308 45CHLOROPHYLL A
lig 225
BCR
F
309 40BETA-CAROTENE
lig 226
PTY
F
310 31PHOSPHATIDYLETHANOLAMINE
lig 227
SQD
F
311 39 GLUCOPYRANOSYL]-SN-GLYCEROL
lig 228
CLA
G
201 65CHLOROPHYLL A
lig 229
CLA
G
202 47CHLOROPHYLL A
lig 230
CLA
G
203 46CHLOROPHYLL A
lig 231
CLA
G
204 45CHLOROPHYLL A
lig 232
BCR
G
205 40BETA-CAROTENE
lig 233
LMG
G
206 431,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 234
CLA
H
201 60CHLOROPHYLL A
lig 235
BCR
I
4001 40BETA-CAROTENE
lig 236
LHG
I
4002 281,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 237
LMK
J
101 35 1-OXIDANYLOCTADECOXY]PROPOXY]BUTAN-2-YL]A
lig 238
BCR
J
102 40BETA-CAROTENE
lig 239
LMG
J
103 291,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 240
CLA
J
104 49CHLOROPHYLL A
lig 241
BCR
J
105 40BETA-CAROTENE
lig 242
BCR
J
106 40BETA-CAROTENE
lig 243
BCR
K
4001 40BETA-CAROTENE
lig 244
CLA
K
4002 45CHLOROPHYLL A
lig 245
CLA
K
4003 55CHLOROPHYLL A
lig 246
CLA
K
4004 45CHLOROPHYLL A
lig 247
CLA
K
4005 48CHLOROPHYLL A
lig 248
BCR
K
4006 40BETA-CAROTENE
lig 249
CLA
L
201 65CHLOROPHYLL A
lig 250
CLA
L
202 65CHLOROPHYLL A
lig 251
BCR
L
203 40BETA-CAROTENE
lig 252
CLA
L
204 65CHLOROPHYLL A
lig 253
CLA
L
205 50CHLOROPHYLL A
lig 254
BCR
L
206 40BETA-CAROTENE
lig 255
CLA
2
301 46CHLOROPHYLL A
lig 256
CHL
2
302 61CHLOROPHYLL B
lig 257
CLA
2
303 50CHLOROPHYLL A
lig 258
CLA
2
304 50CHLOROPHYLL A
lig 259
CLA
2
305 45CHLOROPHYLL A
lig 260
CHL
2
306 47CHLOROPHYLL B
lig 261
CLA
2
307 46CHLOROPHYLL A
lig 262
CLA
2
308 45CHLOROPHYLL A
lig 263
CLA
2
309 45CHLOROPHYLL A
lig 264
CLA
2
310 46CHLOROPHYLL A
lig 265
CLA
2
311 50CHLOROPHYLL A
lig 266
CLA
2
312 44CHLOROPHYLL A
lig 267
CLA
2
313 50CHLOROPHYLL A
lig 268
LUT
2
314 42 CAROTENE-3,3'-DIOL
lig 269
LUT
2
315 42 CAROTENE-3,3'-DIOL
lig 270
LHG
2
316 251,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE