Analysis of Ligand-Protein Contacts in PDB entry:
9NVP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 9NVP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
6OU
B
1001 46 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 2
6OU
B
1002 30 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 3
6OU
B
1003 39 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 4
LBN
B
1004 351-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 5
LBN
B
1005 361-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 6
6OU
B
1006 42 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 7
6OU
A
901 45 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 8
NCA
A
902 9NICOTINAMIDE
lig 9
D39
A
903 36 PHOSPHORYL]OXY-PROPANOIC ACID
lig 10
6OU
A
904 42 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 11
LBN
A
905 411-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 12
6OU
A
906 42 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 13
6OU
A
907 37 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 14
NCA
C
901 9NICOTINAMIDE
lig 15
D39
C
902 36 PHOSPHORYL]OXY-PROPANOIC ACID
lig 16
6OU
C
903 42 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 17
LBN
C
904 411-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 18
6OU
C
905 37 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 19
6OU
D
1001 45 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 20
6OU
D
1002 46 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 21
6OU
D
1003 30 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 22
6OU
D
1004 39 HEXADECANOYLOXY-PROPAN-2-YL] (~{Z})-OCTAD
lig 23
LBN
D
1005 351-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC
lig 24
LBN
D
1006 361-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOC