Analysis of Ligand-Protein Contacts in PDB entry:
9PDD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 9PDD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ADP
A
801 27ADENOSINE-5'-DIPHOSPHATE
lig 2
ATP
A
802 31ADENOSINE-5'-TRIPHOSPHATE
lig 3
ATP
B
801 31ADENOSINE-5'-TRIPHOSPHATE
lig 4
ADP
B
802 27ADENOSINE-5'-DIPHOSPHATE
lig 5
PO4
B
803 5PHOSPHATE ION
lig 6
PO4
B
804 5PHOSPHATE ION
lig 7
ATP
C
801 31ADENOSINE-5'-TRIPHOSPHATE
lig 8
ADP
C
802 27ADENOSINE-5'-DIPHOSPHATE
lig 9
MG
C
803 1MAGNESIUM ION
lig 10
ATP
D
801 31ADENOSINE-5'-TRIPHOSPHATE
lig 11
ADP
D
802 27ADENOSINE-5'-DIPHOSPHATE
lig 12
ATP
E
801 31ADENOSINE-5'-TRIPHOSPHATE
lig 13
ATP
E
802 31ADENOSINE-5'-TRIPHOSPHATE
lig 14
ATP
F
801 31ADENOSINE-5'-TRIPHOSPHATE
lig 15
ADP
F
802 27ADENOSINE-5'-DIPHOSPHATE