Analysis of Ligand-Protein Contacts in PDB entry:
9REL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 11 ligands in PDB entry 9REL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
139 10PHOSPHOSERINE
lig 2
TPO
A
197 11PHOSPHOTHREONINE
lig 3
SEP
A
338 10PHOSPHOSERINE
lig 4
1PE
A
401 16PENTAETHYLENE GLYCOL
lig 5
D8V
A
402 18 4-YL)PIPERIDIN-4-OL
lig 6
D8V
A
403 18 4-YL)PIPERIDIN-4-OL
lig 7
DMS
A
404 4DIMETHYL SULFOXIDE
lig 8
DMS
A
405 4DIMETHYL SULFOXIDE
lig 9
DMS
A
406 4DIMETHYL SULFOXIDE
lig 10
DMS
A
407 4DIMETHYL SULFOXIDE
lig 11
DMS
A
408 4DIMETHYL SULFOXIDE