Analysis of Ligand-Protein Contacts in PDB entry:
9RGE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 47 ligands in PDB entry 9RGE. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
F
10 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 28
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 29
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
PIO
A
3901 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 32
PLM
A
3902 18PALMITIC ACID
lig 33
HEX
A
3903 6HEXANE
lig 34
HEX
A
3904 6HEXANE
lig 35
HEX
A
3905 6HEXANE
lig 36
PGW
B
501 51 OCTADEC-9-ENOATE
lig 37
R16
B
502 16HEXADECANE
lig 38
HEX
B
503 6HEXANE
lig 39
NAG
C
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
P1L
C
502 23S-PALMITOYL-L-CYSTEINE
lig 41
P1L
C
503 23S-PALMITOYL-L-CYSTEINE
lig 42
P1L
C
504 23S-PALMITOYL-L-CYSTEINE
lig 43
R16
D
501 16HEXADECANE
lig 44
D10
D
502 10DECANE
lig 45
HEX
D
503 6HEXANE
lig 46
PIO
D
504 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 47
CLR
L
601 28CHOLESTEROL