Analysis of Ligand-Protein Contacts in PDB entry:
9Y1Q


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 9Y1Q. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
AJP
A
4001 43DIGITONIN
lig 2
CLR
A
4002 28CHOLESTEROL
lig 3
CLR
A
4003 28CHOLESTEROL
lig 4
CLR
A
4004 28CHOLESTEROL
lig 5
P5S
A
4005 22 PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE
lig 6
P5S
A
4006 49 PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE
lig 7
PC1
A
4007 391,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 8
3PH
A
4008 241,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 9
PTY
A
4009 30PHOSPHATIDYLETHANOLAMINE
lig 10
PLM
A
4010 18PALMITIC ACID
lig 11
PLM
A
4011 17PALMITIC ACID
lig 12
PLM
A
4012 18PALMITIC ACID
lig 13
MYR
A
4013 13MYRISTIC ACID
lig 14
D12
A
4014 10DODECANE
lig 15
D10
A
4015 10DECANE
lig 16
HEX
A
4016 6HEXANE
lig 17
PTY
A
4017 36PHOSPHATIDYLETHANOLAMINE
lig 18
PC1
A
4018 261,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
D12
A
4019 12DODECANE
lig 20
D12
A
4020 12DODECANE
lig 21
CLR
A
4021 28CHOLESTEROL
lig 22
PLM
A
4022 18PALMITIC ACID
lig 23
3PH
A
4023 211,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 24
3PH
A
4024 191,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 25
HEX
A
4025 6HEXANE
lig 26
OCT
A
4026 8N-OCTANE
lig 27
HEX
A
4027 4HEXANE
lig 28
ATP
A
4028 31ADENOSINE-5'-TRIPHOSPHATE
lig 29
MG
A
4029 1MAGNESIUM ION
lig 30
ATP
A
4030 31ADENOSINE-5'-TRIPHOSPHATE
lig 31
MG
A
4031 1MAGNESIUM ION
lig 32
VX8
A
4032 33LUMACAFTOR