Analysis of Ligand-Protein Contacts in PDB entry:
9YWN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 61 ligands in PDB entry 9YWN. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GOL
A
501 6GLYCEROL
lig 2
GOL
A
502 6GLYCEROL
lig 3
GOL
A
503 6GLYCEROL
lig 4
FMT
A
504 3FORMIC ACID
lig 5
ACY
A
505 4ACETIC ACID
lig 6
EDO
A
506 41,2-ETHANEDIOL
lig 7
GOL
A
507 6GLYCEROL
lig 8
ACY
A
508 4ACETIC ACID
lig 9
NA
A
509 1SODIUM ION
lig 10
GOL
B
501 6GLYCEROL
lig 11
GOL
B
502 6GLYCEROL
lig 12
GOL
B
503 6GLYCEROL
lig 13
GOL
B
504 6GLYCEROL
lig 14
EDO
B
505 41,2-ETHANEDIOL
lig 15
PEG
B
506 7DI(HYDROXYETHYL)ETHER
lig 16
GOL
B
507 6GLYCEROL
lig 17
EDO
B
508 41,2-ETHANEDIOL
lig 18
FMT
B
509 3FORMIC ACID
lig 19
EDO
B
510 41,2-ETHANEDIOL
lig 20
EDO
B
511 41,2-ETHANEDIOL
lig 21
NA
B
512 1SODIUM ION
lig 22
FMT
C
501 3FORMIC ACID
lig 23
GOL
C
502 6GLYCEROL
lig 24
GOL
C
503 6GLYCEROL
lig 25
ACY
C
504 4ACETIC ACID
lig 26
GOL
C
505 6GLYCEROL
lig 27
FMT
C
506 3FORMIC ACID
lig 28
ACY
C
507 4ACETIC ACID
lig 29
GOL
C
508 6GLYCEROL
lig 30
GOL
C
509 6GLYCEROL
lig 31
GOL
C
510 6GLYCEROL
lig 32
EDO
C
511 41,2-ETHANEDIOL
lig 33
NA
C
512 1SODIUM ION
lig 34
GOL
D
501 6GLYCEROL
lig 35
FMT
D
502 3FORMIC ACID
lig 36
FMT
D
503 3FORMIC ACID
lig 37
GOL
D
504 6GLYCEROL
lig 38
EDO
D
505 41,2-ETHANEDIOL
lig 39
FMT
D
506 3FORMIC ACID
lig 40
GOL
D
507 6GLYCEROL
lig 41
PEG
D
508 7DI(HYDROXYETHYL)ETHER
lig 42
FMT
D
509 3FORMIC ACID
lig 43
NA
D
510 1SODIUM ION
lig 44
GOL
E
501 6GLYCEROL
lig 45
GOL
E
502 6GLYCEROL
lig 46
FMT
E
503 3FORMIC ACID
lig 47
ACY
E
504 4ACETIC ACID
lig 48
EDO
E
505 41,2-ETHANEDIOL
lig 49
GOL
E
506 6GLYCEROL
lig 50
FMT
E
507 3FORMIC ACID
lig 51
NA
E
508 1SODIUM ION
lig 52
FMT
F
501 3FORMIC ACID
lig 53
GOL
F
502 6GLYCEROL
lig 54
EDO
F
503 41,2-ETHANEDIOL
lig 55
EDO
F
504 41,2-ETHANEDIOL
lig 56
ACY
F
505 4ACETIC ACID
lig 57
EDO
F
506 41,2-ETHANEDIOL
lig 58
PEG
F
507 7DI(HYDROXYETHYL)ETHER
lig 59
FMT
F
508 3FORMIC ACID
lig 60
EDO
F
509 41,2-ETHANEDIOL
lig 61
NA
F
510 1SODIUM ION