Analysis of Ligand-Protein Contacts in PDB entry:
9YX2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 9YX2. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BTN
A
601 15BIOTIN
lig 2
BCT
A
602 4BICARBONATE ION
lig 3
ATP
A
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 4
MG
A
604 1MAGNESIUM ION
lig 5
ATP
B
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 6
MG
B
602 1MAGNESIUM ION
lig 7
BCT
B
603 4BICARBONATE ION
lig 8
ATP
C
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 9
MG
C
602 1MAGNESIUM ION
lig 10
BCT
C
603 4BICARBONATE ION
lig 11
ATP
D
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 12
MG
D
602 1MAGNESIUM ION
lig 13
BCT
D
603 4BICARBONATE ION
lig 14
1VU
G
601 52PROPIONYL COENZYME A
lig 15
1VU
G
602 52PROPIONYL COENZYME A
lig 16
1VU
H
601 52PROPIONYL COENZYME A
lig 17
1VU
H
602 52PROPIONYL COENZYME A
lig 18
BTN
I
601 15BIOTIN
lig 19
BTN
J
601 15BIOTIN
lig 20
BTN
K
601 15BIOTIN
lig 21
BTN
L
601 15BIOTIN
lig 22
BTN
Q
601 15BIOTIN
lig 23
BCT
Q
602 4BICARBONATE ION
lig 24
ATP
Q
603 31ADENOSINE-5'-TRIPHOSPHATE
lig 25
MG
Q
604 1MAGNESIUM ION
lig 26
ATP
R
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 27
MG
R
602 1MAGNESIUM ION
lig 28
BCT
R
603 4BICARBONATE ION
lig 29
ATP
S
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 30
MG
S
602 1MAGNESIUM ION
lig 31
BCT
S
603 4BICARBONATE ION
lig 32
ATP
T
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 33
BCT
T
602 4BICARBONATE ION
lig 34
MG
T
603 1MAGNESIUM ION