Analysis of Ligand-Protein Contacts in PDB entry:
9AYF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 9AYF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
Q
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
Q
1002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
Q
1003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
TCR
Q
1004 16CYCLOMETHYLTRYPTOPHAN
lig 13
PO4
Q
1005 5PHOSPHATE ION
lig 14
CA
Q
1006 1CALCIUM ION
lig 15
CA
Q
1007 1CALCIUM ION
lig 16
CA
Q
1008 1CALCIUM ION
lig 17
CA
Q
1009 1CALCIUM ION
lig 18
9IG
Q
1010 21 ETHYL]PROPAN-1-AMINE
lig 19
NAG
R
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
R
1002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
R
1003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
TCR
R
1004 16CYCLOMETHYLTRYPTOPHAN
lig 23
PO4
R
1005 5PHOSPHATE ION
lig 24
CA
R
1006 1CALCIUM ION
lig 25
CA
R
1007 1CALCIUM ION
lig 26
CA
R
1008 1CALCIUM ION
lig 27
CA
R
1009 1CALCIUM ION
lig 28
AV0
R
1010 69LAURYL MALTOSE NEOPENTYL GLYCOL
lig 29
9IG
R
1011 21 ETHYL]PROPAN-1-AMINE