Analysis of Ligand-Protein Contacts in PDB entry:
9B36


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 140 ligands in PDB entry 9B36. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
I
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
I
6 11BETA-D-GALACTOPYRANOSE
lig 7
MAN
I
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
K
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
GAL
K
6 11BETA-D-GALACTOPYRANOSE
lig 16
MAN
K
7 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
K
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 23
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 30
BMA
P
4 11BETA-D-MANNOPYRANOSE
lig 31
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 36
MAN
R
4 11ALPHA-D-MANNOPYRANOSE
lig 37
NAG
R
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
MAN
R
6 11ALPHA-D-MANNOPYRANOSE
lig 39
NAG
R
7 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 43
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 46
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 49
MAN
U
4 11ALPHA-D-MANNOPYRANOSE
lig 50
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 55
MAN
W
4 11ALPHA-D-MANNOPYRANOSE
lig 56
NAG
W
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
GAL
W
6 11BETA-D-GALACTOPYRANOSE
lig 58
MAN
W
7 11ALPHA-D-MANNOPYRANOSE
lig 59
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
BMA
Y
3 11BETA-D-MANNOPYRANOSE
lig 64
MAN
Y
4 11ALPHA-D-MANNOPYRANOSE
lig 65
NAG
Y
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
MAN
Y
6 11ALPHA-D-MANNOPYRANOSE
lig 67
NAG
Y
7 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
BMA
a
3 11BETA-D-MANNOPYRANOSE
lig 73
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
BMA
d
3 11BETA-D-MANNOPYRANOSE
lig 80
BMA
d
4 11BETA-D-MANNOPYRANOSE
lig 81
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 82
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 85
BMA
f
3 11BETA-D-MANNOPYRANOSE
lig 86
MAN
f
4 11ALPHA-D-MANNOPYRANOSE
lig 87
NAG
f
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
MAN
f
6 11ALPHA-D-MANNOPYRANOSE
lig 89
NAG
f
7 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 92
BMA
g
3 11BETA-D-MANNOPYRANOSE
lig 93
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 94
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 95
BMA
h
3 11BETA-D-MANNOPYRANOSE
lig 96
MAN
h
4 11ALPHA-D-MANNOPYRANOSE
lig 97
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 98
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
BMA
i
3 11BETA-D-MANNOPYRANOSE
lig 100
MAN
i
4 11ALPHA-D-MANNOPYRANOSE
lig 101
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 102
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 103
2J9
A
1001 16 BENZOTHIADIAZINE 1,1-DIOXIDE
lig 104
GLU
A
1002 10GLUTAMIC ACID
lig 105
POV
A
1003 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 106
POV
A
1004 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 107
POV
A
1005 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 108
CLR
A
1006 28CHOLESTEROL
lig 109
CLR
A
1007 28CHOLESTEROL
lig 110
CLR
A
1008 28CHOLESTEROL
lig 111
CLR
A
1009 28CHOLESTEROL
lig 112
POV
A
1010 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 113
POV
B
1001 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 114
2J9
B
1002 16 BENZOTHIADIAZINE 1,1-DIOXIDE
lig 115
GLU
B
1003 10GLUTAMIC ACID
lig 116
POV
B
1004 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 117
POV
B
1005 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 118
CLR
B
1006 28CHOLESTEROL
lig 119
POV
C
1001 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 120
2J9
C
1002 16 BENZOTHIADIAZINE 1,1-DIOXIDE
lig 121
GLU
C
1003 10GLUTAMIC ACID
lig 122
POV
C
1004 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 123
POV
C
1005 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 124
POV
C
1006 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 125
CLR
C
1007 28CHOLESTEROL
lig 126
CLR
C
1008 28CHOLESTEROL
lig 127
CLR
C
1009 28CHOLESTEROL
lig 128
POV
D
1001 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 129
2J9
D
1002 16 BENZOTHIADIAZINE 1,1-DIOXIDE
lig 130
GLU
D
1003 10GLUTAMIC ACID
lig 131
POV
D
1004 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 132
POV
D
1005 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 133
ZN
E
1001 1ZINC ION
lig 134
CA
E
1002 1CALCIUM ION
lig 135
ZN
F
1001 1ZINC ION
lig 136
CA
F
1002 1CALCIUM ION
lig 137
ZN
G
1001 1ZINC ION
lig 138
CA
G
1002 1CALCIUM ION
lig 139
ZN
H
1001 1ZINC ION
lig 140
CA
H
1002 1CALCIUM ION