Analysis of Ligand-Protein Contacts in PDB entry:
9B38


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 78 ligands in PDB entry 9B38. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 9
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 12
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 24
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 27
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 32
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 35
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 38
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 41
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 42
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 43
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 48
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 49
MAN
Q
5 11ALPHA-D-MANNOPYRANOSE
lig 50
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 53
GLU
A
1001 10GLUTAMIC ACID
lig 54
NAG
A
1002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
A
1003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
MAN
A
1004 11ALPHA-D-MANNOPYRANOSE
lig 57
MAN
A
1005 11ALPHA-D-MANNOPYRANOSE
lig 58
NAG
A
1006 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
NAG
A
1007 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
A
1008 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
GLU
B
1001 10GLUTAMIC ACID
lig 62
NAG
B
1002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
B
1003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
NAG
B
1004 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
NAG
B
1005 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
GLU
C
1001 10GLUTAMIC ACID
lig 67
NAG
C
1002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
C
1003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
MAN
C
1004 11ALPHA-D-MANNOPYRANOSE
lig 70
MAN
C
1005 11ALPHA-D-MANNOPYRANOSE
lig 71
NAG
C
1006 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
NAG
C
1007 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
NAG
C
1008 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
GLU
D
1001 10GLUTAMIC ACID
lig 75
NAG
D
1002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
D
1003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
NAG
D
1004 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
D
1005 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE