Analysis of Ligand-Protein Contacts in PDB entry:
9B4J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 420 ligands in PDB entry 9B4J. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DTH
A
1 7D-THREONINE
lig 2
DLE
A
2 8D-LEUCINE
lig 3
DLY
A
3 9D-LYSINE
lig 4
DIL
A
4 8D-ISOLEUCINE
lig 5
DVA
A
5 7D-VALINE
lig 6
DTR
A
6 14D-TRYPTOPHAN
lig 7
DSN
A
7 7D-SERINE
lig 8
DTH
B
1 7D-THREONINE
lig 9
DLE
B
2 8D-LEUCINE
lig 10
DLY
B
3 9D-LYSINE
lig 11
DIL
B
4 8D-ISOLEUCINE
lig 12
DVA
B
5 7D-VALINE
lig 13
DTR
B
6 14D-TRYPTOPHAN
lig 14
DSN
B
7 7D-SERINE
lig 15
DTH
C
1 7D-THREONINE
lig 16
DLE
C
2 8D-LEUCINE
lig 17
DLY
C
3 9D-LYSINE
lig 18
DIL
C
4 8D-ISOLEUCINE
lig 19
DVA
C
5 7D-VALINE
lig 20
DTR
C
6 14D-TRYPTOPHAN
lig 21
DSN
C
7 7D-SERINE
lig 22
DTH
D
1 7D-THREONINE
lig 23
DLE
D
2 8D-LEUCINE
lig 24
DLY
D
3 9D-LYSINE
lig 25
DIL
D
4 8D-ISOLEUCINE
lig 26
DVA
D
5 7D-VALINE
lig 27
DTR
D
6 14D-TRYPTOPHAN
lig 28
DSN
D
7 7D-SERINE
lig 29
DTH
E
1 7D-THREONINE
lig 30
DLE
E
2 8D-LEUCINE
lig 31
DLY
E
3 9D-LYSINE
lig 32
DIL
E
4 8D-ISOLEUCINE
lig 33
DVA
E
5 7D-VALINE
lig 34
DTR
E
6 14D-TRYPTOPHAN
lig 35
DSN
E
7 7D-SERINE
lig 36
DTH
F
1 7D-THREONINE
lig 37
DLE
F
2 8D-LEUCINE
lig 38
DLY
F
3 9D-LYSINE
lig 39
DIL
F
4 8D-ISOLEUCINE
lig 40
DVA
F
5 7D-VALINE
lig 41
DTR
F
6 14D-TRYPTOPHAN
lig 42
DSN
F
7 7D-SERINE
lig 43
DTH
G
1 7D-THREONINE
lig 44
DLE
G
2 8D-LEUCINE
lig 45
DLY
G
3 9D-LYSINE
lig 46
DIL
G
4 8D-ISOLEUCINE
lig 47
DVA
G
5 7D-VALINE
lig 48
DTR
G
6 14D-TRYPTOPHAN
lig 49
DSN
G
7 7D-SERINE
lig 50
DTH
H
1 7D-THREONINE
lig 51
DLE
H
2 8D-LEUCINE
lig 52
DLY
H
3 9D-LYSINE
lig 53
DIL
H
4 8D-ISOLEUCINE
lig 54
DVA
H
5 7D-VALINE
lig 55
DTR
H
6 14D-TRYPTOPHAN
lig 56
DSN
H
7 7D-SERINE
lig 57
DTH
I
1 7D-THREONINE
lig 58
DLE
I
2 8D-LEUCINE
lig 59
DLY
I
3 9D-LYSINE
lig 60
DIL
I
4 8D-ISOLEUCINE
lig 61
DVA
I
5 7D-VALINE
lig 62
DTR
I
6 14D-TRYPTOPHAN
lig 63
DSN
I
7 7D-SERINE
lig 64
DTH
J
1 7D-THREONINE
lig 65
DLE
J
2 8D-LEUCINE
lig 66
DLY
J
3 9D-LYSINE
lig 67
DIL
J
4 8D-ISOLEUCINE
lig 68
DVA
J
5 7D-VALINE
lig 69
DTR
J
6 14D-TRYPTOPHAN
lig 70
DSN
J
7 7D-SERINE
lig 71
DTH
K
1 7D-THREONINE
lig 72
DLE
K
2 8D-LEUCINE
lig 73
DLY
K
3 9D-LYSINE
lig 74
DIL
K
4 8D-ISOLEUCINE
lig 75
DVA
K
5 7D-VALINE
lig 76
DTR
K
6 14D-TRYPTOPHAN
lig 77
DSN
K
7 7D-SERINE
lig 78
DTH
L
1 7D-THREONINE
lig 79
DLE
L
2 8D-LEUCINE
lig 80
DLY
L
3 9D-LYSINE
lig 81
DIL
L
4 8D-ISOLEUCINE
lig 82
DVA
L
5 7D-VALINE
lig 83
DTR
L
6 14D-TRYPTOPHAN
lig 84
DSN
L
7 7D-SERINE
lig 85
DTH
M
1 7D-THREONINE
lig 86
DLE
M
2 8D-LEUCINE
lig 87
DLY
M
3 9D-LYSINE
lig 88
DIL
M
4 8D-ISOLEUCINE
lig 89
DVA
M
5 7D-VALINE
lig 90
DTR
M
6 14D-TRYPTOPHAN
lig 91
DSN
M
7 7D-SERINE
lig 92
DTH
N
1 7D-THREONINE
lig 93
DLE
N
2 8D-LEUCINE
lig 94
DLY
N
3 9D-LYSINE
lig 95
DIL
N
4 8D-ISOLEUCINE
lig 96
DVA
N
5 7D-VALINE
lig 97
DTR
N
6 14D-TRYPTOPHAN
lig 98
DSN
N
7 7D-SERINE
lig 99
DTH
O
1 7D-THREONINE
lig 100
DLE
O
2 8D-LEUCINE
lig 101
DLY
O
3 9D-LYSINE
lig 102
DIL
O
4 8D-ISOLEUCINE
lig 103
DVA
O
5 7D-VALINE
lig 104
DTR
O
6 14D-TRYPTOPHAN
lig 105
DSN
O
7 7D-SERINE
lig 106
DTH
P
1 7D-THREONINE
lig 107
DLE
P
2 8D-LEUCINE
lig 108
DLY
P
3 9D-LYSINE
lig 109
DIL
P
4 8D-ISOLEUCINE
lig 110
DVA
P
5 7D-VALINE
lig 111
DTR
P
6 14D-TRYPTOPHAN
lig 112
DSN
P
7 7D-SERINE
lig 113
DTH
Q
1 7D-THREONINE
lig 114
DLE
Q
2 8D-LEUCINE
lig 115
DLY
Q
3 9D-LYSINE
lig 116
DIL
Q
4 8D-ISOLEUCINE
lig 117
DVA
Q
5 7D-VALINE
lig 118
DTR
Q
6 14D-TRYPTOPHAN
lig 119
DSN
Q
7 7D-SERINE
lig 120
DTH
R
1 7D-THREONINE
lig 121
DLE
R
2 8D-LEUCINE
lig 122
DLY
R
3 9D-LYSINE
lig 123
DIL
R
4 8D-ISOLEUCINE
lig 124
DVA
R
5 7D-VALINE
lig 125
DTR
R
6 14D-TRYPTOPHAN
lig 126
DSN
R
7 7D-SERINE
lig 127
DTH
S
1 7D-THREONINE
lig 128
DLE
S
2 8D-LEUCINE
lig 129
DLY
S
3 9D-LYSINE
lig 130
DIL
S
4 8D-ISOLEUCINE
lig 131
DVA
S
5 7D-VALINE
lig 132
DTR
S
6 14D-TRYPTOPHAN
lig 133
DSN
S
7 7D-SERINE
lig 134
DTH
T
1 7D-THREONINE
lig 135
DLE
T
2 8D-LEUCINE
lig 136
DLY
T
3 9D-LYSINE
lig 137
DIL
T
4 8D-ISOLEUCINE
lig 138
DVA
T
5 7D-VALINE
lig 139
DTR
T
6 14D-TRYPTOPHAN
lig 140
DSN
T
7 7D-SERINE
lig 141
DTH
U
1 7D-THREONINE
lig 142
DLE
U
2 8D-LEUCINE
lig 143
DLY
U
3 9D-LYSINE
lig 144
DIL
U
4 8D-ISOLEUCINE
lig 145
DVA
U
5 7D-VALINE
lig 146
DTR
U
6 14D-TRYPTOPHAN
lig 147
DSN
U
7 7D-SERINE
lig 148
DTH
V
1 7D-THREONINE
lig 149
DLE
V
2 8D-LEUCINE
lig 150
DLY
V
3 9D-LYSINE
lig 151
DIL
V
4 8D-ISOLEUCINE
lig 152
DVA
V
5 7D-VALINE
lig 153
DTR
V
6 14D-TRYPTOPHAN
lig 154
DSN
V
7 7D-SERINE
lig 155
DTH
W
1 7D-THREONINE
lig 156
DLE
W
2 8D-LEUCINE
lig 157
DLY
W
3 9D-LYSINE
lig 158
DIL
W
4 8D-ISOLEUCINE
lig 159
DVA
W
5 7D-VALINE
lig 160
DTR
W
6 14D-TRYPTOPHAN
lig 161
DSN
W
7 7D-SERINE
lig 162
DTH
X
1 7D-THREONINE
lig 163
DLE
X
2 8D-LEUCINE
lig 164
DLY
X
3 9D-LYSINE
lig 165
DIL
X
4 8D-ISOLEUCINE
lig 166
DVA
X
5 7D-VALINE
lig 167
DTR
X
6 14D-TRYPTOPHAN
lig 168
DSN
X
7 7D-SERINE
lig 169
DTH
Y
1 7D-THREONINE
lig 170
DLE
Y
2 8D-LEUCINE
lig 171
DLY
Y
3 9D-LYSINE
lig 172
DIL
Y
4 8D-ISOLEUCINE
lig 173
DVA
Y
5 7D-VALINE
lig 174
DTR
Y
6 14D-TRYPTOPHAN
lig 175
DSN
Y
7 7D-SERINE
lig 176
DTH
Z
1 7D-THREONINE
lig 177
DLE
Z
2 8D-LEUCINE
lig 178
DLY
Z
3 9D-LYSINE
lig 179
DIL
Z
4 8D-ISOLEUCINE
lig 180
DVA
Z
5 7D-VALINE
lig 181
DTR
Z
6 14D-TRYPTOPHAN
lig 182
DSN
Z
7 7D-SERINE
lig 183
DTH
0
1 7D-THREONINE
lig 184
DLE
0
2 8D-LEUCINE
lig 185
DLY
0
3 9D-LYSINE
lig 186
DIL
0
4 8D-ISOLEUCINE
lig 187
DVA
0
5 7D-VALINE
lig 188
DTR
0
6 14D-TRYPTOPHAN
lig 189
DSN
0
7 7D-SERINE
lig 190
DTH
1
1 7D-THREONINE
lig 191
DLE
1
2 8D-LEUCINE
lig 192
DLY
1
3 9D-LYSINE
lig 193
DIL
1
4 8D-ISOLEUCINE
lig 194
DVA
1
5 7D-VALINE
lig 195
DTR
1
6 14D-TRYPTOPHAN
lig 196
DSN
1
7 7D-SERINE
lig 197
DTH
2
1 7D-THREONINE
lig 198
DLE
2
2 8D-LEUCINE
lig 199
DLY
2
3 9D-LYSINE
lig 200
DIL
2
4 8D-ISOLEUCINE
lig 201
DVA
2
5 7D-VALINE
lig 202
DTR
2
6 14D-TRYPTOPHAN
lig 203
DSN
2
7 7D-SERINE
lig 204
DTH
3
1 7D-THREONINE
lig 205
DLE
3
2 8D-LEUCINE
lig 206
DLY
3
3 9D-LYSINE
lig 207
DIL
3
4 8D-ISOLEUCINE
lig 208
DVA
3
5 7D-VALINE
lig 209
DTR
3
6 14D-TRYPTOPHAN
lig 210
DSN
3
7 7D-SERINE
lig 211
DTH
4
1 7D-THREONINE
lig 212
DLE
4
2 8D-LEUCINE
lig 213
DLY
4
3 9D-LYSINE
lig 214
DIL
4
4 8D-ISOLEUCINE
lig 215
DVA
4
5 7D-VALINE
lig 216
DTR
4
6 14D-TRYPTOPHAN
lig 217
DSN
4
7 7D-SERINE
lig 218
DTH
5
1 7D-THREONINE
lig 219
DLE
5
2 8D-LEUCINE
lig 220
DLY
5
3 9D-LYSINE
lig 221
DIL
5
4 8D-ISOLEUCINE
lig 222
DVA
5
5 7D-VALINE
lig 223
DTR
5
6 14D-TRYPTOPHAN
lig 224
DSN
5
7 7D-SERINE
lig 225
DTH
6
1 7D-THREONINE
lig 226
DLE
6
2 8D-LEUCINE
lig 227
DLY
6
3 9D-LYSINE
lig 228
DIL
6
4 8D-ISOLEUCINE
lig 229
DVA
6
5 7D-VALINE
lig 230
DTR
6
6 14D-TRYPTOPHAN
lig 231
DSN
6
7 7D-SERINE
lig 232
DTH
7
1 7D-THREONINE
lig 233
DLE
7
2 8D-LEUCINE
lig 234
DLY
7
3 9D-LYSINE
lig 235
DIL
7
4 8D-ISOLEUCINE
lig 236
DVA
7
5 7D-VALINE
lig 237
DTR
7
6 14D-TRYPTOPHAN
lig 238
DSN
7
7 7D-SERINE
lig 239
DTH
8
1 7D-THREONINE
lig 240
DLE
8
2 8D-LEUCINE
lig 241
DLY
8
3 9D-LYSINE
lig 242
DIL
8
4 8D-ISOLEUCINE
lig 243
DVA
8
5 7D-VALINE
lig 244
DTR
8
6 14D-TRYPTOPHAN
lig 245
DSN
8
7 7D-SERINE
lig 246
DTH
9
1 7D-THREONINE
lig 247
DLE
9
2 8D-LEUCINE
lig 248
DLY
9
3 9D-LYSINE
lig 249
DIL
9
4 8D-ISOLEUCINE
lig 250
DVA
9
5 7D-VALINE
lig 251
DTR
9
6 14D-TRYPTOPHAN
lig 252
DSN
9
7 7D-SERINE
lig 253
DTH
a
1 7D-THREONINE
lig 254
DLE
a
2 8D-LEUCINE
lig 255
DLY
a
3 9D-LYSINE
lig 256
DIL
a
4 8D-ISOLEUCINE
lig 257
DVA
a
5 7D-VALINE
lig 258
DTR
a
6 14D-TRYPTOPHAN
lig 259
DSN
a
7 7D-SERINE
lig 260
DTH
b
1 7D-THREONINE
lig 261
DLE
b
2 8D-LEUCINE
lig 262
DLY
b
3 9D-LYSINE
lig 263
DIL
b
4 8D-ISOLEUCINE
lig 264
DVA
b
5 7D-VALINE
lig 265
DTR
b
6 14D-TRYPTOPHAN
lig 266
DSN
b
7 7D-SERINE
lig 267
DTH
c
1 7D-THREONINE
lig 268
DLE
c
2 8D-LEUCINE
lig 269
DLY
c
3 9D-LYSINE
lig 270
DIL
c
4 8D-ISOLEUCINE
lig 271
DVA
c
5 7D-VALINE
lig 272
DTR
c
6 14D-TRYPTOPHAN
lig 273
DSN
c
7 7D-SERINE
lig 274
DTH
d
1 7D-THREONINE
lig 275
DLE
d
2 8D-LEUCINE
lig 276
DLY
d
3 9D-LYSINE
lig 277
DIL
d
4 8D-ISOLEUCINE
lig 278
DVA
d
5 7D-VALINE
lig 279
DTR
d
6 14D-TRYPTOPHAN
lig 280
DSN
d
7 7D-SERINE
lig 281
DTH
e
1 7D-THREONINE
lig 282
DLE
e
2 8D-LEUCINE
lig 283
DLY
e
3 9D-LYSINE
lig 284
DIL
e
4 8D-ISOLEUCINE
lig 285
DVA
e
5 7D-VALINE
lig 286
DTR
e
6 14D-TRYPTOPHAN
lig 287
DSN
e
7 7D-SERINE
lig 288
DTH
f
1 7D-THREONINE
lig 289
DLE
f
2 8D-LEUCINE
lig 290
DLY
f
3 9D-LYSINE
lig 291
DIL
f
4 8D-ISOLEUCINE
lig 292
DVA
f
5 7D-VALINE
lig 293
DTR
f
6 14D-TRYPTOPHAN
lig 294
DSN
f
7 7D-SERINE
lig 295
DTH
g
1 7D-THREONINE
lig 296
DLE
g
2 8D-LEUCINE
lig 297
DLY
g
3 9D-LYSINE
lig 298
DIL
g
4 8D-ISOLEUCINE
lig 299
DVA
g
5 7D-VALINE
lig 300
DTR
g
6 14D-TRYPTOPHAN
lig 301
DSN
g
7 7D-SERINE
lig 302
DTH
h
1 7D-THREONINE
lig 303
DLE
h
2 8D-LEUCINE
lig 304
DLY
h
3 9D-LYSINE
lig 305
DIL
h
4 8D-ISOLEUCINE
lig 306
DVA
h
5 7D-VALINE
lig 307
DTR
h
6 14D-TRYPTOPHAN
lig 308
DSN
h
7 7D-SERINE
lig 309
DTH
i
1 7D-THREONINE
lig 310
DLE
i
2 8D-LEUCINE
lig 311
DLY
i
3 9D-LYSINE
lig 312
DIL
i
4 8D-ISOLEUCINE
lig 313
DVA
i
5 7D-VALINE
lig 314
DTR
i
6 14D-TRYPTOPHAN
lig 315
DSN
i
7 7D-SERINE
lig 316
DTH
j
1 7D-THREONINE
lig 317
DLE
j
2 8D-LEUCINE
lig 318
DLY
j
3 9D-LYSINE
lig 319
DIL
j
4 8D-ISOLEUCINE
lig 320
DVA
j
5 7D-VALINE
lig 321
DTR
j
6 14D-TRYPTOPHAN
lig 322
DSN
j
7 7D-SERINE
lig 323
DTH
k
1 7D-THREONINE
lig 324
DLE
k
2 8D-LEUCINE
lig 325
DLY
k
3 9D-LYSINE
lig 326
DIL
k
4 8D-ISOLEUCINE
lig 327
DVA
k
5 7D-VALINE
lig 328
DTR
k
6 14D-TRYPTOPHAN
lig 329
DSN
k
7 7D-SERINE
lig 330
DTH
l
1 7D-THREONINE
lig 331
DLE
l
2 8D-LEUCINE
lig 332
DLY
l
3 9D-LYSINE
lig 333
DIL
l
4 8D-ISOLEUCINE
lig 334
DVA
l
5 7D-VALINE
lig 335
DTR
l
6 14D-TRYPTOPHAN
lig 336
DSN
l
7 7D-SERINE
lig 337
DTH
m
1 7D-THREONINE
lig 338
DLE
m
2 8D-LEUCINE
lig 339
DLY
m
3 9D-LYSINE
lig 340
DIL
m
4 8D-ISOLEUCINE
lig 341
DVA
m
5 7D-VALINE
lig 342
DTR
m
6 14D-TRYPTOPHAN
lig 343
DSN
m
7 7D-SERINE
lig 344
DTH
n
1 7D-THREONINE
lig 345
DLE
n
2 8D-LEUCINE
lig 346
DLY
n
3 9D-LYSINE
lig 347
DIL
n
4 8D-ISOLEUCINE
lig 348
DVA
n
5 7D-VALINE
lig 349
DTR
n
6 14D-TRYPTOPHAN
lig 350
DSN
n
7 7D-SERINE
lig 351
DTH
o
1 7D-THREONINE
lig 352
DLE
o
2 8D-LEUCINE
lig 353
DLY
o
3 9D-LYSINE
lig 354
DIL
o
4 8D-ISOLEUCINE
lig 355
DVA
o
5 7D-VALINE
lig 356
DTR
o
6 14D-TRYPTOPHAN
lig 357
DSN
o
7 7D-SERINE
lig 358
DTH
p
1 7D-THREONINE
lig 359
DLE
p
2 8D-LEUCINE
lig 360
DLY
p
3 9D-LYSINE
lig 361
DIL
p
4 8D-ISOLEUCINE
lig 362
DVA
p
5 7D-VALINE
lig 363
DTR
p
6 14D-TRYPTOPHAN
lig 364
DSN
p
7 7D-SERINE
lig 365
DTH
q
1 7D-THREONINE
lig 366
DLE
q
2 8D-LEUCINE
lig 367
DLY
q
3 9D-LYSINE
lig 368
DIL
q
4 8D-ISOLEUCINE
lig 369
DVA
q
5 7D-VALINE
lig 370
DTR
q
6 14D-TRYPTOPHAN
lig 371
DSN
q
7 7D-SERINE
lig 372
DTH
r
1 7D-THREONINE
lig 373
DLE
r
2 8D-LEUCINE
lig 374
DLY
r
3 9D-LYSINE
lig 375
DIL
r
4 8D-ISOLEUCINE
lig 376
DVA
r
5 7D-VALINE
lig 377
DTR
r
6 14D-TRYPTOPHAN
lig 378
DSN
r
7 7D-SERINE
lig 379
DTH
s
1 7D-THREONINE
lig 380
DLE
s
2 8D-LEUCINE
lig 381
DLY
s
3 9D-LYSINE
lig 382
DIL
s
4 8D-ISOLEUCINE
lig 383
DVA
s
5 7D-VALINE
lig 384
DTR
s
6 14D-TRYPTOPHAN
lig 385
DSN
s
7 7D-SERINE
lig 386
DTH
t
1 7D-THREONINE
lig 387
DLE
t
2 8D-LEUCINE
lig 388
DLY
t
3 9D-LYSINE
lig 389
DIL
t
4 8D-ISOLEUCINE
lig 390
DVA
t
5 7D-VALINE
lig 391
DTR
t
6 14D-TRYPTOPHAN
lig 392
DSN
t
7 7D-SERINE
lig 393
DTH
u
1 7D-THREONINE
lig 394
DLE
u
2 8D-LEUCINE
lig 395
DLY
u
3 9D-LYSINE
lig 396
DIL
u
4 8D-ISOLEUCINE
lig 397
DVA
u
5 7D-VALINE
lig 398
DTR
u
6 14D-TRYPTOPHAN
lig 399
DSN
u
7 7D-SERINE
lig 400
DTH
v
1 7D-THREONINE
lig 401
DLE
v
2 8D-LEUCINE
lig 402
DLY
v
3 9D-LYSINE
lig 403
DIL
v
4 8D-ISOLEUCINE
lig 404
DVA
v
5 7D-VALINE
lig 405
DTR
v
6 14D-TRYPTOPHAN
lig 406
DSN
v
7 7D-SERINE
lig 407
DTH
w
1 7D-THREONINE
lig 408
DLE
w
2 8D-LEUCINE
lig 409
DLY
w
3 9D-LYSINE
lig 410
DIL
w
4 8D-ISOLEUCINE
lig 411
DVA
w
5 7D-VALINE
lig 412
DTR
w
6 14D-TRYPTOPHAN
lig 413
DSN
w
7 7D-SERINE
lig 414
DTH
x
1 7D-THREONINE
lig 415
DLE
x
2 8D-LEUCINE
lig 416
DLY
x
3 9D-LYSINE
lig 417
DIL
x
4 8D-ISOLEUCINE
lig 418
DVA
x
5 7D-VALINE
lig 419
DTR
x
6 14D-TRYPTOPHAN
lig 420
DSN
x
7 7D-SERINE