Analysis of Ligand-Protein Contacts in PDB entry:
9B4L


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 174 ligands in PDB entry 9B4L. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DTH
E
1 7D-THREONINE
lig 2
DLE
E
2 8D-LEUCINE
lig 3
DLY
E
3 9D-LYSINE
lig 4
DIL
E
4 8D-ISOLEUCINE
lig 5
DVA
E
5 7D-VALINE
lig 6
DTR
E
6 14D-TRYPTOPHAN
lig 7
DIL
E
7 9D-ISOLEUCINE
lig 8
DTH
F
1 7D-THREONINE
lig 9
DLE
F
2 8D-LEUCINE
lig 10
DLY
F
3 9D-LYSINE
lig 11
DIL
F
4 8D-ISOLEUCINE
lig 12
DVA
F
5 7D-VALINE
lig 13
DTR
F
6 14D-TRYPTOPHAN
lig 14
DIL
F
7 9D-ISOLEUCINE
lig 15
DTH
G
1 7D-THREONINE
lig 16
DLE
G
2 8D-LEUCINE
lig 17
DLY
G
3 9D-LYSINE
lig 18
DIL
G
4 8D-ISOLEUCINE
lig 19
DVA
G
5 7D-VALINE
lig 20
DTR
G
6 14D-TRYPTOPHAN
lig 21
DIL
G
7 9D-ISOLEUCINE
lig 22
DTH
H
1 7D-THREONINE
lig 23
DLE
H
2 8D-LEUCINE
lig 24
DLY
H
3 9D-LYSINE
lig 25
DIL
H
4 8D-ISOLEUCINE
lig 26
DVA
H
5 7D-VALINE
lig 27
DTR
H
6 14D-TRYPTOPHAN
lig 28
DIL
H
7 9D-ISOLEUCINE
lig 29
DTH
I
1 7D-THREONINE
lig 30
DLE
I
2 8D-LEUCINE
lig 31
DLY
I
3 9D-LYSINE
lig 32
DIL
I
4 8D-ISOLEUCINE
lig 33
DVA
I
5 7D-VALINE
lig 34
DTR
I
6 14D-TRYPTOPHAN
lig 35
DIL
I
7 9D-ISOLEUCINE
lig 36
DTH
J
1 7D-THREONINE
lig 37
DLE
J
2 8D-LEUCINE
lig 38
DLY
J
3 9D-LYSINE
lig 39
DIL
J
4 8D-ISOLEUCINE
lig 40
DVA
J
5 7D-VALINE
lig 41
DTR
J
6 14D-TRYPTOPHAN
lig 42
DIL
J
7 9D-ISOLEUCINE
lig 43
DTH
K
1 7D-THREONINE
lig 44
DLE
K
2 8D-LEUCINE
lig 45
DLY
K
3 9D-LYSINE
lig 46
DIL
K
4 8D-ISOLEUCINE
lig 47
DVA
K
5 7D-VALINE
lig 48
DTR
K
6 14D-TRYPTOPHAN
lig 49
DIL
K
7 9D-ISOLEUCINE
lig 50
DTH
L
1 7D-THREONINE
lig 51
DLE
L
2 8D-LEUCINE
lig 52
DLY
L
3 9D-LYSINE
lig 53
DIL
L
4 8D-ISOLEUCINE
lig 54
DVA
L
5 7D-VALINE
lig 55
DTR
L
6 14D-TRYPTOPHAN
lig 56
DIL
L
7 9D-ISOLEUCINE
lig 57
DTH
Q
1 7D-THREONINE
lig 58
DLE
Q
2 8D-LEUCINE
lig 59
DLY
Q
3 9D-LYSINE
lig 60
DIL
Q
4 8D-ISOLEUCINE
lig 61
DVA
Q
5 7D-VALINE
lig 62
DTR
Q
6 14D-TRYPTOPHAN
lig 63
DIL
Q
7 9D-ISOLEUCINE
lig 64
DTH
R
1 7D-THREONINE
lig 65
DLE
R
2 8D-LEUCINE
lig 66
DLY
R
3 9D-LYSINE
lig 67
DIL
R
4 8D-ISOLEUCINE
lig 68
DVA
R
5 7D-VALINE
lig 69
DTR
R
6 14D-TRYPTOPHAN
lig 70
DIL
R
7 9D-ISOLEUCINE
lig 71
DTH
S
1 7D-THREONINE
lig 72
DLE
S
2 8D-LEUCINE
lig 73
DLY
S
3 9D-LYSINE
lig 74
DIL
S
4 8D-ISOLEUCINE
lig 75
DVA
S
5 7D-VALINE
lig 76
DTR
S
6 14D-TRYPTOPHAN
lig 77
DIL
S
7 9D-ISOLEUCINE
lig 78
DTH
T
1 7D-THREONINE
lig 79
DLE
T
2 8D-LEUCINE
lig 80
DLY
T
3 9D-LYSINE
lig 81
DIL
T
4 8D-ISOLEUCINE
lig 82
DVA
T
5 7D-VALINE
lig 83
DTR
T
6 14D-TRYPTOPHAN
lig 84
DIL
T
7 9D-ISOLEUCINE
lig 85
DTH
U
1 7D-THREONINE
lig 86
DLE
U
2 8D-LEUCINE
lig 87
DLY
U
3 9D-LYSINE
lig 88
DIL
U
4 8D-ISOLEUCINE
lig 89
DVA
U
5 7D-VALINE
lig 90
DTR
U
6 14D-TRYPTOPHAN
lig 91
DIL
U
7 9D-ISOLEUCINE
lig 92
DTH
V
1 7D-THREONINE
lig 93
DLE
V
2 8D-LEUCINE
lig 94
DLY
V
3 9D-LYSINE
lig 95
DIL
V
4 8D-ISOLEUCINE
lig 96
DVA
V
5 7D-VALINE
lig 97
DTR
V
6 14D-TRYPTOPHAN
lig 98
DIL
V
7 9D-ISOLEUCINE
lig 99
DTH
W
1 7D-THREONINE
lig 100
DLE
W
2 8D-LEUCINE
lig 101
DLY
W
3 9D-LYSINE
lig 102
DIL
W
4 8D-ISOLEUCINE
lig 103
DVA
W
5 7D-VALINE
lig 104
DTR
W
6 14D-TRYPTOPHAN
lig 105
DIL
W
7 9D-ISOLEUCINE
lig 106
DTH
X
1 7D-THREONINE
lig 107
DLE
X
2 8D-LEUCINE
lig 108
DLY
X
3 9D-LYSINE
lig 109
DIL
X
4 8D-ISOLEUCINE
lig 110
DVA
X
5 7D-VALINE
lig 111
DTR
X
6 14D-TRYPTOPHAN
lig 112
DIL
X
7 9D-ISOLEUCINE
lig 113
DTH
2
1 7D-THREONINE
lig 114
DLE
2
2 8D-LEUCINE
lig 115
DLY
2
3 9D-LYSINE
lig 116
DIL
2
4 8D-ISOLEUCINE
lig 117
DVA
2
5 7D-VALINE
lig 118
DTR
2
6 14D-TRYPTOPHAN
lig 119
DIL
2
7 9D-ISOLEUCINE
lig 120
DTH
3
1 7D-THREONINE
lig 121
DLE
3
2 8D-LEUCINE
lig 122
DLY
3
3 9D-LYSINE
lig 123
DIL
3
4 8D-ISOLEUCINE
lig 124
DVA
3
5 7D-VALINE
lig 125
DTR
3
6 14D-TRYPTOPHAN
lig 126
DIL
3
7 9D-ISOLEUCINE
lig 127
DTH
4
1 7D-THREONINE
lig 128
DLE
4
2 8D-LEUCINE
lig 129
DLY
4
3 9D-LYSINE
lig 130
DIL
4
4 8D-ISOLEUCINE
lig 131
DVA
4
5 7D-VALINE
lig 132
DTR
4
6 14D-TRYPTOPHAN
lig 133
DIL
4
7 9D-ISOLEUCINE
lig 134
DTH
5
1 7D-THREONINE
lig 135
DLE
5
2 8D-LEUCINE
lig 136
DLY
5
3 9D-LYSINE
lig 137
DIL
5
4 8D-ISOLEUCINE
lig 138
DVA
5
5 7D-VALINE
lig 139
DTR
5
6 14D-TRYPTOPHAN
lig 140
DIL
5
7 9D-ISOLEUCINE
lig 141
DTH
6
1 7D-THREONINE
lig 142
DLE
6
2 8D-LEUCINE
lig 143
DLY
6
3 9D-LYSINE
lig 144
DIL
6
4 8D-ISOLEUCINE
lig 145
DVA
6
5 7D-VALINE
lig 146
DTR
6
6 14D-TRYPTOPHAN
lig 147
DIL
6
7 9D-ISOLEUCINE
lig 148
DTH
7
1 7D-THREONINE
lig 149
DLE
7
2 8D-LEUCINE
lig 150
DLY
7
3 9D-LYSINE
lig 151
DIL
7
4 8D-ISOLEUCINE
lig 152
DVA
7
5 7D-VALINE
lig 153
DTR
7
6 14D-TRYPTOPHAN
lig 154
DIL
7
7 9D-ISOLEUCINE
lig 155
DTH
8
1 7D-THREONINE
lig 156
DLE
8
2 8D-LEUCINE
lig 157
DLY
8
3 9D-LYSINE
lig 158
DIL
8
4 8D-ISOLEUCINE
lig 159
DVA
8
5 7D-VALINE
lig 160
DTR
8
6 14D-TRYPTOPHAN
lig 161
DIL
8
7 9D-ISOLEUCINE
lig 162
DTH
9
1 7D-THREONINE
lig 163
DLE
9
2 8D-LEUCINE
lig 164
DLY
9
3 9D-LYSINE
lig 165
DIL
9
4 8D-ISOLEUCINE
lig 166
DVA
9
5 7D-VALINE
lig 167
DTR
9
6 14D-TRYPTOPHAN
lig 168
DIL
9
7 9D-ISOLEUCINE
lig 169
EDT
A
801 20 AMINO}-ACETIC ACID
lig 170
EDT
C
801 20 AMINO}-ACETIC ACID
lig 171
EDT
M
801 20 AMINO}-ACETIC ACID
lig 172
EDT
O
801 20 AMINO}-ACETIC ACID
lig 173
EDT
0
801 20 AMINO}-ACETIC ACID
lig 174
EDT
3
801 20 AMINO}-ACETIC ACID