Analysis of Ligand-Protein Contacts in PDB entry:
9D5W


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 9D5W. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PGO
A
301 5S-1,2-PROPANEDIOL
lig 2
PGO
A
302 5S-1,2-PROPANEDIOL
lig 3
CL
A
303 1CHLORIDE ION
lig 4
CL
A
304 1CHLORIDE ION
lig 5
K
A
305 1POTASSIUM ION
lig 6
PGO
B
301 5S-1,2-PROPANEDIOL
lig 7
PGO
B
302 5S-1,2-PROPANEDIOL
lig 8
CL
B
303 1CHLORIDE ION
lig 9
CL
B
304 1CHLORIDE ION
lig 10
K
B
305 1POTASSIUM ION
lig 11
PGR
C
301 5R-1,2-PROPANEDIOL
lig 12
CL
C
302 1CHLORIDE ION
lig 13
CL
C
303 1CHLORIDE ION
lig 14
K
C
304 1POTASSIUM ION
lig 15
PGO
D
301 5S-1,2-PROPANEDIOL
lig 16
PGO
D
302 5S-1,2-PROPANEDIOL
lig 17
PGO
D
303 5S-1,2-PROPANEDIOL
lig 18
SO4
D
304 5SULFATE ION
lig 19
K
D
305 1POTASSIUM ION
lig 20
CL
E
301 1CHLORIDE ION
lig 21
K
E
302 1POTASSIUM ION
lig 22
CL
F
301 1CHLORIDE ION
lig 23
CL
F
302 1CHLORIDE ION
lig 24
CL
F
303 1CHLORIDE ION
lig 25
CL
F
304 1CHLORIDE ION
lig 26
PGO
G
301 5S-1,2-PROPANEDIOL
lig 27
SO4
G
302 5SULFATE ION
lig 28
SO4
G
303 5SULFATE ION
lig 29
CL
G
304 1CHLORIDE ION
lig 30
CL
G
305 1CHLORIDE ION
lig 31
K
G
306 1POTASSIUM ION
lig 32
CL
H
301 1CHLORIDE ION
lig 33
CL
H
302 1CHLORIDE ION
lig 34
PGO
I
301 5S-1,2-PROPANEDIOL
lig 35
CL
I
302 1CHLORIDE ION
lig 36
CL
I
303 1CHLORIDE ION