Analysis of Ligand-Protein Contacts in PDB entry:
9DBN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 9DBN. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 13
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 16
CLR
A
2001 28CHOLESTEROL
lig 17
CLR
A
2002 28CHOLESTEROL
lig 18
CLR
A
2003 28CHOLESTEROL
lig 19
PCW
A
2004 471,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
LPE
A
2005 231-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 21
LPE
A
2006 231-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 22
PCW
A
2007 411,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 23
PCW
A
2008 401,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 24
LPE
A
2009 341-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25
LPE
A
2010 221-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 26
LPE
A
2011 221-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 27
P5S
A
2012 45 PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE
lig 28
P5S
A
2013 49 PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE
lig 29
CLR
A
2014 28CHOLESTEROL