Analysis of Ligand-Protein Contacts in PDB entry:
9DIO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 63 ligands in PDB entry 9DIO. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GAL
S
1 12BETA-D-GALACTOPYRANOSE
lig 2
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
GAL
S
3 11BETA-D-GALACTOPYRANOSE
lig 4
SIA
S
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 5
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 13
GAL
W
1 12BETA-D-GALACTOPYRANOSE
lig 14
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
GAL
W
3 11BETA-D-GALACTOPYRANOSE
lig 16
SIA
W
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 17
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 20
NAG
Y
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
GAL
Y
2 11BETA-D-GALACTOPYRANOSE
lig 22
SIA
Y
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 23
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 26
GLC
a
1 12ALPHA-D-GLUCOPYRANOSE
lig 27
GAL
a
2 11BETA-D-GALACTOPYRANOSE
lig 28
NAG
a
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
GAL
a
4 11BETA-D-GALACTOPYRANOSE
lig 30
SIA
a
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 31
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
BMA
b
3 11BETA-D-MANNOPYRANOSE
lig 34
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
BMA
c
3 11BETA-D-MANNOPYRANOSE
lig 37
GAL
d
1 12BETA-D-GALACTOPYRANOSE
lig 38
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
GAL
d
3 11BETA-D-GALACTOPYRANOSE
lig 40
SIA
d
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 41
GAL
e
1 12BETA-D-GALACTOPYRANOSE
lig 42
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
GAL
e
3 11BETA-D-GALACTOPYRANOSE
lig 44
SIA
e
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 45
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
BMA
f
3 11BETA-D-MANNOPYRANOSE
lig 48
NAG
A
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
A
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
B
201 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
C
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
E
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
G
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
G
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
I
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
I
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
K
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
M
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
NAG
M
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
O
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
O
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
P
201 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
Q
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE