Analysis of Ligand-Protein Contacts in PDB entry:
9DK5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 9DK5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
D
8 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
D
9 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
2001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
A
2002 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
A
2003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
2004 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
Y01
A
2005 35CHOLESTEROL HEMISUCCINATE
lig 17
PCW
A
2006 481,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
CLR
A
2007 28CHOLESTEROL
lig 19
PCW
A
2008 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
Y01
A
2009 35CHOLESTEROL HEMISUCCINATE
lig 21
PCW
A
2010 511,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 22
PCW
A
2011 471,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 23
P5S
A
2012 35 PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE
lig 24
LPE
A
2013 221-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25
Y01
A
2014 35CHOLESTEROL HEMISUCCINATE
lig 26
9Z9
A
2015 39 (METHOXYMETHYL)BUTOXY]SPIROST-5-EN
lig 27
P3X
A
2016 45 HEXADECANOATE
lig 28
NAG
C
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
C
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
C
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE