Analysis of Ligand-Protein Contacts in PDB entry:
9DMB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 141 ligands in PDB entry 9DMB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 13
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
Q
5 11ALPHA-D-MANNOPYRANOSE
lig 18
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 21
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 24
MAN
S
4 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
S
5 11ALPHA-D-MANNOPYRANOSE
lig 26
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 29
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 34
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 37
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 44
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 45
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE
lig 46
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
BMA
b
3 11BETA-D-MANNOPYRANOSE
lig 51
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
BMA
c
3 11BETA-D-MANNOPYRANOSE
lig 54
MAN
c
4 11ALPHA-D-MANNOPYRANOSE
lig 55
MAN
c
5 11ALPHA-D-MANNOPYRANOSE
lig 56
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
BMA
d
3 11BETA-D-MANNOPYRANOSE
lig 59
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
BMA
e
3 11BETA-D-MANNOPYRANOSE
lig 62
MAN
e
4 11ALPHA-D-MANNOPYRANOSE
lig 63
MAN
e
5 11ALPHA-D-MANNOPYRANOSE
lig 64
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
BMA
f
3 11BETA-D-MANNOPYRANOSE
lig 67
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
BMA
h
3 11BETA-D-MANNOPYRANOSE
lig 72
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
BMA
i
3 11BETA-D-MANNOPYRANOSE
lig 75
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
NAG
k
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
k
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
NAG
l
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 80
NAG
l
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
BMA
l
3 11BETA-D-MANNOPYRANOSE
lig 82
MAN
l
4 11ALPHA-D-MANNOPYRANOSE
lig 83
MAN
l
5 11ALPHA-D-MANNOPYRANOSE
lig 84
NAG
m
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 85
NAG
m
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 86
NAG
n
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 87
NAG
n
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
BMA
n
3 11BETA-D-MANNOPYRANOSE
lig 89
NAG
o
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
NAG
o
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
BMA
o
3 11BETA-D-MANNOPYRANOSE
lig 92
MAN
o
4 11ALPHA-D-MANNOPYRANOSE
lig 93
MAN
o
5 11ALPHA-D-MANNOPYRANOSE
lig 94
NAG
p
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 95
NAG
p
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 96
BMA
p
3 11BETA-D-MANNOPYRANOSE
lig 97
NAG
q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 98
NAG
q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
BMA
q
3 11BETA-D-MANNOPYRANOSE
lig 100
MAN
q
4 11ALPHA-D-MANNOPYRANOSE
lig 101
MAN
q
5 11ALPHA-D-MANNOPYRANOSE
lig 102
NAG
r
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 103
NAG
r
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 104
BMA
r
3 11BETA-D-MANNOPYRANOSE
lig 105
NAG
s
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 106
NAG
s
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 107
NAG
t
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 108
NAG
t
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 109
BMA
t
3 11BETA-D-MANNOPYRANOSE
lig 110
NAG
u
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 111
NAG
u
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 112
BMA
u
3 11BETA-D-MANNOPYRANOSE
lig 113
NAG
v
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 114
NAG
v
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 115
NAG
E
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 116
NAG
E
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 117
NAG
I
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 118
NAG
I
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 119
NAG
J
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 120
NAG
J
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 121
NAG
L
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 122
NAG
L
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 123
NAG
L
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 124
NAG
L
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 125
NAG
L
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 126
NAG
L
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 127
NAG
L
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 128
NAG
F
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 129
NAG
F
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 130
NAG
F
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 131
NAG
F
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 132
NAG
F
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 133
NAG
F
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 134
NAG
F
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 135
NAG
K
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 136
NAG
K
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 137
NAG
K
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 138
NAG
K
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 139
NAG
K
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 140
NAG
K
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 141
NAG
K
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE