Analysis of Ligand-Protein Contacts in PDB entry:
9DME


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 45 ligands in PDB entry 9DME. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
J
293 3ACETYL GROUP
lig 2
NH2
J
315 1AMINO GROUP
lig 3
ACE
L
293 3ACETYL GROUP
lig 4
NH2
L
315 1AMINO GROUP
lig 5
ACE
A
293 3ACETYL GROUP
lig 6
NH2
A
315 1AMINO GROUP
lig 7
ACE
C
293 3ACETYL GROUP
lig 8
NH2
C
315 1AMINO GROUP
lig 9
ACE
D
293 3ACETYL GROUP
lig 10
NH2
D
315 1AMINO GROUP
lig 11
ACE
F
293 3ACETYL GROUP
lig 12
NH2
F
315 1AMINO GROUP
lig 13
ACE
G
293 3ACETYL GROUP
lig 14
NH2
G
315 1AMINO GROUP
lig 15
ACE
I
293 3ACETYL GROUP
lig 16
NH2
I
315 1AMINO GROUP
lig 17
ACE
M
293 3ACETYL GROUP
lig 18
NH2
M
315 1AMINO GROUP
lig 19
ACE
O
293 3ACETYL GROUP
lig 20
NH2
O
315 1AMINO GROUP
lig 21
ACE
K
293 3ACETYL GROUP
lig 22
NH2
K
315 1AMINO GROUP
lig 23
ACE
N
293 3ACETYL GROUP
lig 24
NH2
N
315 1AMINO GROUP
lig 25
ACE
E
293 3ACETYL GROUP
lig 26
NH2
E
315 1AMINO GROUP
lig 27
ACE
B
293 3ACETYL GROUP
lig 28
NH2
B
315 1AMINO GROUP
lig 29
ACE
H
293 3ACETYL GROUP
lig 30
NH2
H
315 1AMINO GROUP
lig 31
8VH
J
401 81,3-DIMETHYLBENZENE
lig 32
8VH
L
401 81,3-DIMETHYLBENZENE
lig 33
8VH
A
401 81,3-DIMETHYLBENZENE
lig 34
8VH
C
401 81,3-DIMETHYLBENZENE
lig 35
8VH
D
401 81,3-DIMETHYLBENZENE
lig 36
8VH
F
401 81,3-DIMETHYLBENZENE
lig 37
8VH
G
401 81,3-DIMETHYLBENZENE
lig 38
8VH
I
401 81,3-DIMETHYLBENZENE
lig 39
8VH
M
401 81,3-DIMETHYLBENZENE
lig 40
8VH
O
401 81,3-DIMETHYLBENZENE
lig 41
8VH
K
401 81,3-DIMETHYLBENZENE
lig 42
8VH
N
401 81,3-DIMETHYLBENZENE
lig 43
8VH
E
401 81,3-DIMETHYLBENZENE
lig 44
8VH
B
401 81,3-DIMETHYLBENZENE
lig 45
8VH
H
401 81,3-DIMETHYLBENZENE