Analysis of Ligand-Protein Contacts in PDB entry:
9DMG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 41 ligands in PDB entry 9DMG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 20
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 27
BMA
K
4 11BETA-D-MANNOPYRANOSE
lig 28
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 30
POV
A
501 47 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 31
MAN
A
502 11ALPHA-D-MANNOPYRANOSE
lig 32
CLR
C
501 28CHOLESTEROL
lig 33
CLR
E
501 28CHOLESTEROL
lig 34
CLR
E
502 28CHOLESTEROL
lig 35
POV
E
503 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 36
CLR
D
501 28CHOLESTEROL
lig 37
CLR
D
502 28CHOLESTEROL
lig 38
POV
D
503 40 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 39
CLR
B
501 28CHOLESTEROL
lig 40
CLR
B
502 28CHOLESTEROL
lig 41
POV
B
503 44 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL