Analysis of Ligand-Protein Contacts in PDB entry:
9DMJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 9DMJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 21
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
POV
A
501 47 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 30
CLR
E
501 28CHOLESTEROL
lig 31
POV
E
502 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 32
CLR
D
501 28CHOLESTEROL
lig 33
POV
D
502 40 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 34
NAG
B
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
CLR
B
502 28CHOLESTEROL
lig 36
CLR
B
503 28CHOLESTEROL
lig 37
POV
B
504 44 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 38
NAG
H
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE