Analysis of Ligand-Protein Contacts in PDB entry:
9DMQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 45 ligands in PDB entry 9DMQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
I
6 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
I
7 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
J
6 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 24
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
L
6 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 32
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 34
ACH
A
501 10ACETYLCHOLINE
lig 35
CLR
E
501 28CHOLESTEROL
lig 36
POV
E
502 38 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 37
NAG
D
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
CLR
D
502 28CHOLESTEROL
lig 39
POV
D
503 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 40
CLR
D
504 28CHOLESTEROL
lig 41
CLR
D
505 28CHOLESTEROL
lig 42
POV
D
506 40 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 43
CLR
B
501 28CHOLESTEROL
lig 44
CLR
B
502 28CHOLESTEROL
lig 45
POV
B
503 44 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL