Analysis of Ligand-Protein Contacts in PDB entry:
9DMT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 9DMT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 14
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 19
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 25
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 27
POV
A
501 47 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 28
CLR
C
501 28CHOLESTEROL
lig 29
CLR
E
501 28CHOLESTEROL
lig 30
POV
E
502 52 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 31
NAG
D
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
CLR
D
502 28CHOLESTEROL
lig 33
CLR
D
503 28CHOLESTEROL
lig 34
POV
D
504 40 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL
lig 35
NAG
B
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
CLR
B
502 28CHOLESTEROL
lig 37
CLR
B
503 28CHOLESTEROL
lig 38
POV
B
504 44 ENOYLOXY]PROPYL 2-(TRIMETHYLAMMONIO)ETHYL