Analysis of Ligand-Protein Contacts in PDB entry:
9DUV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 9DUV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HIC
A
73 114-METHYL-HISTIDINE
lig 2
HIC
B
73 114-METHYL-HISTIDINE
lig 3
HIC
C
73 114-METHYL-HISTIDINE
lig 4
HIC
D
73 114-METHYL-HISTIDINE
lig 5
HIC
E
73 114-METHYL-HISTIDINE
lig 6
HIC
F
73 114-METHYL-HISTIDINE
lig 7
EEP
M
2 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 8
DTH
M
4 7D-THREONINE
lig 9
HYP
M
6 84-HYDROXYPROLINE
lig 10
EEP
N
2 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 11
DTH
N
4 7D-THREONINE
lig 12
HYP
N
6 84-HYDROXYPROLINE
lig 13
EEP
O
2 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 14
DTH
O
4 7D-THREONINE
lig 15
HYP
O
6 84-HYDROXYPROLINE
lig 16
EEP
P
2 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 17
DTH
P
4 7D-THREONINE
lig 18
HYP
P
6 84-HYDROXYPROLINE
lig 19
EEP
Q
2 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 20
DTH
Q
4 7D-THREONINE
lig 21
HYP
Q
6 84-HYDROXYPROLINE
lig 22
EEP
R
2 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 23
DTH
R
4 7D-THREONINE
lig 24
HYP
R
6 84-HYDROXYPROLINE
lig 25
EEP
S
2 10(2S,4R)-2-AMINO-4,5-DIHYDROXY-4-METHYLPENT
lig 26
DTH
S
4 7D-THREONINE
lig 27
HYP
S
6 84-HYDROXYPROLINE
lig 28
ADP
A
401 27ADENOSINE-5'-DIPHOSPHATE
lig 29
MG
A
402 1MAGNESIUM ION
lig 30
ADP
B
401 27ADENOSINE-5'-DIPHOSPHATE
lig 31
MG
B
402 1MAGNESIUM ION
lig 32
ADP
C
401 27ADENOSINE-5'-DIPHOSPHATE
lig 33
MG
C
402 1MAGNESIUM ION
lig 34
ADP
D
401 27ADENOSINE-5'-DIPHOSPHATE
lig 35
MG
D
402 1MAGNESIUM ION
lig 36
ADP
E
401 27ADENOSINE-5'-DIPHOSPHATE
lig 37
MG
E
402 1MAGNESIUM ION
lig 38
ADP
F
401 27ADENOSINE-5'-DIPHOSPHATE
lig 39
MG
F
402 1MAGNESIUM ION