Analysis of Ligand-Protein Contacts in PDB entry:
9DW8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 8 ligands in PDB entry 9DW8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
G
198 11PHOSPHOTHREONINE
lig 2
B44
A
1501 39 TRIPHOSPHATE)
lig 3
B44
A
1502 39 TRIPHOSPHATE)
lig 4
MG
A
1503 1MAGNESIUM ION
lig 5
MG
A
1504 1MAGNESIUM ION
lig 6
MG
G
401 1MAGNESIUM ION
lig 7
MG
G
402 1MAGNESIUM ION
lig 8
ANP
G
403 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE