Analysis of Ligand-Protein Contacts in PDB entry:
9ED0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 239 ligands in PDB entry 9ED0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
A2M
2
27 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 2
PSU
2
36 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 3
PSU
2
93 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 4
A2M
2
99 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 5
PSU
2
105 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 6
PSU
2
109 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 7
OMU
2
116 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 8
PSU
2
119 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 9
OMU
2
121 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 10
A2M
2
159 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 11
A2M
2
166 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 12
OMU
2
172 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 13
OMC
2
174 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 14
PSU
2
296 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 15
OMU
2
354 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 16
PSU
2
406 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 17
OMU
2
428 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 18
OMG
2
436 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 19
OMC
2
462 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 20
A2M
2
468 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 21
A2M
2
484 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 22
OMG
2
509 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 23
A2M
2
512 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 24
OMC
2
517 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 25
PSU
2
572 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 26
A2M
2
576 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 27
A2M
2
590 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 28
OMG
2
601 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 29
OMG
2
644 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 30
PSU
2
649 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 31
PSU
2
651 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 32
A2M
2
668 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 33
PSU
2
681 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 34
OMG
2
683 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 35
PSU
2
686 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 36
PSU
2
814 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 37
PSU
2
815 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 38
PSU
2
822 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 39
PSU
2
863 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 40
A2M
2
1031 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 41
PSU
2
1045 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 42
PSU
2
1046 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 43
PSU
2
1056 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 44
PSU
2
1081 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 45
PSU
2
1136 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 46
PSU
2
1174 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 47
PSU
2
1177 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 48
PSU
2
1232 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 49
PSU
2
1238 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 50
PSU
2
1244 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 51
B8N
2
1248 28 ACID
lig 52
OMC
2
1272 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 53
OMU
2
1288 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 54
OMU
2
1326 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 55
OMG
2
1328 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 56
4AC
2
1337 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 57
PSU
2
1347 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 58
A2M
2
1383 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 59
OMC
2
1391 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 60
OMU
2
1442 21O2'-METHYLURIDINE 5'-MONOPHOSPHATE
lig 61
PSU
2
1445 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 62
OMG
2
1447 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 63
OMG
2
1490 24O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 64
PSU
2
1625 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 65
7MG
2
1639 247N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHAT
lig 66
PSU
2
1643 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 67
A2M
2
1678 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 68
PSU
2
1692 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 69
OMC
2
1703 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 70
6MZ
2
1832 23N6-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 71
4AC
2
1842 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 72
MA6
2
1850 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 73
MA6
2
1851 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 74
K
2
1901 1POTASSIUM ION
lig 75
K
2
1902 1POTASSIUM ION
lig 76
K
2
1903 1POTASSIUM ION
lig 77
K
2
1904 1POTASSIUM ION
lig 78
K
2
1905 1POTASSIUM ION
lig 79
K
2
1906 1POTASSIUM ION
lig 80
K
2
1907 1POTASSIUM ION
lig 81
K
2
1908 1POTASSIUM ION
lig 82
K
2
1909 1POTASSIUM ION
lig 83
K
2
1910 1POTASSIUM ION
lig 84
K
2
1911 1POTASSIUM ION
lig 85
K
2
1912 1POTASSIUM ION
lig 86
K
2
1913 1POTASSIUM ION
lig 87
K
2
1914 1POTASSIUM ION
lig 88
K
2
1915 1POTASSIUM ION
lig 89
K
2
1916 1POTASSIUM ION
lig 90
K
2
1917 1POTASSIUM ION
lig 91
K
2
1918 1POTASSIUM ION
lig 92
K
2
1919 1POTASSIUM ION
lig 93
K
2
1920 1POTASSIUM ION
lig 94
K
2
1921 1POTASSIUM ION
lig 95
K
2
1922 1POTASSIUM ION
lig 96
K
2
1923 1POTASSIUM ION
lig 97
K
2
1924 1POTASSIUM ION
lig 98
K
2
1925 1POTASSIUM ION
lig 99
K
2
1926 1POTASSIUM ION
lig 100
K
2
1927 1POTASSIUM ION
lig 101
K
2
1928 1POTASSIUM ION
lig 102
K
2
1929 1POTASSIUM ION
lig 103
K
2
1930 1POTASSIUM ION
lig 104
K
2
1931 1POTASSIUM ION
lig 105
K
2
1932 1POTASSIUM ION
lig 106
K
2
1933 1POTASSIUM ION
lig 107
K
2
1934 1POTASSIUM ION
lig 108
K
2
1935 1POTASSIUM ION
lig 109
K
2
1936 1POTASSIUM ION
lig 110
K
2
1937 1POTASSIUM ION
lig 111
K
2
1938 1POTASSIUM ION
lig 112
K
2
1939 1POTASSIUM ION
lig 113
K
2
1940 1POTASSIUM ION
lig 114
K
2
1941 1POTASSIUM ION
lig 115
K
2
1942 1POTASSIUM ION
lig 116
K
2
1943 1POTASSIUM ION
lig 117
K
2
1944 1POTASSIUM ION
lig 118
K
2
1945 1POTASSIUM ION
lig 119
K
2
1946 1POTASSIUM ION
lig 120
K
2
1947 1POTASSIUM ION
lig 121
K
2
1948 1POTASSIUM ION
lig 122
K
2
1949 1POTASSIUM ION
lig 123
K
2
1950 1POTASSIUM ION
lig 124
K
2
1951 1POTASSIUM ION
lig 125
K
2
1952 1POTASSIUM ION
lig 126
K
2
1953 1POTASSIUM ION
lig 127
K
2
1954 1POTASSIUM ION
lig 128
K
2
1955 1POTASSIUM ION
lig 129
K
2
1956 1POTASSIUM ION
lig 130
K
2
1957 1POTASSIUM ION
lig 131
K
2
1958 1POTASSIUM ION
lig 132
K
2
1959 1POTASSIUM ION
lig 133
K
2
1960 1POTASSIUM ION
lig 134
K
2
1961 1POTASSIUM ION
lig 135
K
2
1962 1POTASSIUM ION
lig 136
K
2
1963 1POTASSIUM ION
lig 137
K
2
1964 1POTASSIUM ION
lig 138
K
2
1965 1POTASSIUM ION
lig 139
MG
2
1966 1MAGNESIUM ION
lig 140
MG
2
1967 1MAGNESIUM ION
lig 141
MG
2
1968 1MAGNESIUM ION
lig 142
MG
2
1969 1MAGNESIUM ION
lig 143
MG
2
1970 1MAGNESIUM ION
lig 144
MG
2
1971 1MAGNESIUM ION
lig 145
MG
2
1972 1MAGNESIUM ION
lig 146
MG
2
1973 1MAGNESIUM ION
lig 147
MG
2
1974 1MAGNESIUM ION
lig 148
MG
2
1975 1MAGNESIUM ION
lig 149
MG
2
1976 1MAGNESIUM ION
lig 150
MG
2
1977 1MAGNESIUM ION
lig 151
MG
2
1978 1MAGNESIUM ION
lig 152
MG
2
1979 1MAGNESIUM ION
lig 153
MG
2
1980 1MAGNESIUM ION
lig 154
MG
2
1981 1MAGNESIUM ION
lig 155
MG
2
1982 1MAGNESIUM ION
lig 156
MG
2
1983 1MAGNESIUM ION
lig 157
MG
2
1984 1MAGNESIUM ION
lig 158
MG
2
1985 1MAGNESIUM ION
lig 159
MG
2
1986 1MAGNESIUM ION
lig 160
MG
2
1987 1MAGNESIUM ION
lig 161
MG
2
1988 1MAGNESIUM ION
lig 162
MG
2
1989 1MAGNESIUM ION
lig 163
MG
2
1990 1MAGNESIUM ION
lig 164
MG
2
1991 1MAGNESIUM ION
lig 165
MG
2
1992 1MAGNESIUM ION
lig 166
MG
2
1993 1MAGNESIUM ION
lig 167
MG
2
1994 1MAGNESIUM ION
lig 168
MG
2
1995 1MAGNESIUM ION
lig 169
MG
2
1996 1MAGNESIUM ION
lig 170
MG
2
1997 1MAGNESIUM ION
lig 171
MG
2
1998 1MAGNESIUM ION
lig 172
MG
2
1999 1MAGNESIUM ION
lig 173
MG
2
2000 1MAGNESIUM ION
lig 174
MG
2
2001 1MAGNESIUM ION
lig 175
MG
2
2002 1MAGNESIUM ION
lig 176
MG
2
2003 1MAGNESIUM ION
lig 177
MG
2
2004 1MAGNESIUM ION
lig 178
MG
2
2005 1MAGNESIUM ION
lig 179
MG
2
2006 1MAGNESIUM ION
lig 180
MG
2
2007 1MAGNESIUM ION
lig 181
MG
2
2008 1MAGNESIUM ION
lig 182
MG
2
2009 1MAGNESIUM ION
lig 183
MG
2
2010 1MAGNESIUM ION
lig 184
MG
2
2011 1MAGNESIUM ION
lig 185
MG
2
2012 1MAGNESIUM ION
lig 186
MG
2
2013 1MAGNESIUM ION
lig 187
MG
2
2014 1MAGNESIUM ION
lig 188
MG
2
2015 1MAGNESIUM ION
lig 189
MG
2
2016 1MAGNESIUM ION
lig 190
MG
2
2017 1MAGNESIUM ION
lig 191
MG
2
2018 1MAGNESIUM ION
lig 192
MG
2
2019 1MAGNESIUM ION
lig 193
MG
2
2020 1MAGNESIUM ION
lig 194
MG
2
2021 1MAGNESIUM ION
lig 195
MG
2
2022 1MAGNESIUM ION
lig 196
MG
2
2023 1MAGNESIUM ION
lig 197
MG
2
2024 1MAGNESIUM ION
lig 198
MG
2
2025 1MAGNESIUM ION
lig 199
MG
2
2026 1MAGNESIUM ION
lig 200
MG
2
2027 1MAGNESIUM ION
lig 201
MG
2
2028 1MAGNESIUM ION
lig 202
MG
2
2029 1MAGNESIUM ION
lig 203
MG
2
2030 1MAGNESIUM ION
lig 204
MG
2
2031 1MAGNESIUM ION
lig 205
MG
2
2032 1MAGNESIUM ION
lig 206
MG
2
2033 1MAGNESIUM ION
lig 207
MG
2
2034 1MAGNESIUM ION
lig 208
MG
2
2035 1MAGNESIUM ION
lig 209
MG
2
2036 1MAGNESIUM ION
lig 210
MG
2
2037 1MAGNESIUM ION
lig 211
MG
2
2038 1MAGNESIUM ION
lig 212
MG
2
2039 1MAGNESIUM ION
lig 213
MG
2
2040 1MAGNESIUM ION
lig 214
MG
2
2041 1MAGNESIUM ION
lig 215
MG
2
2042 1MAGNESIUM ION
lig 216
MG
2
2043 1MAGNESIUM ION
lig 217
MG
2
2044 1MAGNESIUM ION
lig 218
MG
2
2045 1MAGNESIUM ION
lig 219
MG
2
2046 1MAGNESIUM ION
lig 220
MG
2
2047 1MAGNESIUM ION
lig 221
MG
2
2048 1MAGNESIUM ION
lig 222
K
2
2049 1POTASSIUM ION
lig 223
MG
2
2050 1MAGNESIUM ION
lig 224
MG
2
2051 1MAGNESIUM ION
lig 225
MG
2
2052 1MAGNESIUM ION
lig 226
MG
2
2053 1MAGNESIUM ION
lig 227
MG
2
2054 1MAGNESIUM ION
lig 228
MG
2
2055 1MAGNESIUM ION
lig 229
MG
2
2056 1MAGNESIUM ION
lig 230
MG
2
2057 1MAGNESIUM ION
lig 231
K
2
2058 1POTASSIUM ION
lig 232
K
2
2059 1POTASSIUM ION
lig 233
MG
G
301 1MAGNESIUM ION
lig 234
K
S
201 1POTASSIUM ION
lig 235
K
X
201 1POTASSIUM ION
lig 236
ZN
a
201 1ZINC ION
lig 237
ZN
d
101 1ZINC ION
lig 238
K
d
102 1POTASSIUM ION
lig 239
ZN
f
201 1ZINC ION