Analysis of Ligand-Protein Contacts in PDB entry:
9EKF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 9EKF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
E
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
E
6 11BETA-D-GALACTOPYRANOSE
lig 7
SIA
E
7 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 8
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
F
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
GAL
F
6 11BETA-D-GALACTOPYRANOSE
lig 14
SIA
F
7 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 15
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 18
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
J
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
GAL
J
6 11BETA-D-GALACTOPYRANOSE
lig 21
SIA
J
7 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 22
NAG
A
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
A
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
B
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
B
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
B
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
C
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
C
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
C
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
C
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE