Analysis of Ligand-Protein Contacts in PDB entry:
9F40


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 123 ligands in PDB entry 9F40. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
E
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
E
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
G
6 11ALPHA-D-MANNOPYRANOSE
lig 18
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 21
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 24
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 27
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 28
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 31
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 32
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 35
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 36
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 37
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 38
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 41
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 42
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 43
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 46
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 49
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 50
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 51
MAN
N
6 11ALPHA-D-MANNOPYRANOSE
lig 52
MAN
N
7 11ALPHA-D-MANNOPYRANOSE
lig 53
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 56
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 57
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 60
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 61
ERG
A
301 29ERGOSTEROL
lig 62
SO4
A
302 5SULFATE ION
lig 63
SO4
A
303 5SULFATE ION
lig 64
ZN
A
304 1ZINC ION
lig 65
ZN
A
305 1ZINC ION
lig 66
ZN
A
306 1ZINC ION
lig 67
PEG
A
307 7DI(HYDROXYETHYL)ETHER
lig 68
CCN
A
308 3ACETONITRILE
lig 69
CCN
A
309 3ACETONITRILE
lig 70
PEG
A
310 7DI(HYDROXYETHYL)ETHER
lig 71
CCN
A
311 3ACETONITRILE
lig 72
ZN
A
312 1ZINC ION
lig 73
ZN
A
313 1ZINC ION
lig 74
PEG
A
314 7DI(HYDROXYETHYL)ETHER
lig 75
SO4
A
315 5SULFATE ION
lig 76
ERG
B
301 29ERGOSTEROL
lig 77
SO4
B
302 5SULFATE ION
lig 78
ZN
B
303 1ZINC ION
lig 79
ZN
B
304 1ZINC ION
lig 80
ZN
B
305 1ZINC ION
lig 81
ZN
B
306 1ZINC ION
lig 82
PEG
B
307 7DI(HYDROXYETHYL)ETHER
lig 83
PEG
B
308 7DI(HYDROXYETHYL)ETHER
lig 84
PEG
B
309 7DI(HYDROXYETHYL)ETHER
lig 85
PEG
B
310 7DI(HYDROXYETHYL)ETHER
lig 86
CCN
B
311 3ACETONITRILE
lig 87
CCN
B
312 3ACETONITRILE
lig 88
ZN
B
313 1ZINC ION
lig 89
ZN
B
314 1ZINC ION
lig 90
SO4
B
315 5SULFATE ION
lig 91
ERG
C
301 29ERGOSTEROL
lig 92
SO4
C
302 5SULFATE ION
lig 93
ZN
C
303 1ZINC ION
lig 94
ZN
C
304 1ZINC ION
lig 95
ZN
C
305 1ZINC ION
lig 96
ZN
C
306 1ZINC ION
lig 97
PEG
C
307 7DI(HYDROXYETHYL)ETHER
lig 98
PEG
C
308 7DI(HYDROXYETHYL)ETHER
lig 99
PEG
C
309 7DI(HYDROXYETHYL)ETHER
lig 100
PEG
C
310 7DI(HYDROXYETHYL)ETHER
lig 101
CCN
C
311 3ACETONITRILE
lig 102
CCN
C
312 3ACETONITRILE
lig 103
CCN
C
313 3ACETONITRILE
lig 104
ZN
C
314 1ZINC ION
lig 105
ZN
C
315 1ZINC ION
lig 106
ZN
C
316 1ZINC ION
lig 107
ZN
C
317 1ZINC ION
lig 108
ZN
C
318 1ZINC ION
lig 109
SO4
C
319 5SULFATE ION
lig 110
ZN
C
320 1ZINC ION
lig 111
ERG
D
301 29ERGOSTEROL
lig 112
SO4
D
302 5SULFATE ION
lig 113
ZN
D
303 1ZINC ION
lig 114
ZN
D
304 1ZINC ION
lig 115
ZN
D
305 1ZINC ION
lig 116
PEG
D
306 7DI(HYDROXYETHYL)ETHER
lig 117
CCN
D
307 3ACETONITRILE
lig 118
ZN
D
308 1ZINC ION
lig 119
ZN
D
309 1ZINC ION
lig 120
ZN
D
310 1ZINC ION
lig 121
ZN
D
311 1ZINC ION
lig 122
SO4
D
312 5SULFATE ION
lig 123
ZN
D
313 1ZINC ION