Analysis of Ligand-Protein Contacts in PDB entry:
9FAM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 58 ligands in PDB entry 9FAM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
P1L
C
380 23S-PALMITOYL-L-CYSTEINE
lig 2
P1L
C
381 23S-PALMITOYL-L-CYSTEINE
lig 3
P1L
C
385 23S-PALMITOYL-L-CYSTEINE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
10 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 17
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 20
MAN
J
4 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
J
5 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
J
6 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 28
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 29
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 32
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
M
6 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 38
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
PIO
A
3901 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 41
ABU
A
3902 7GAMMA-AMINO-BUTANOIC ACID
lig 42
CL
A
3903 1CHLORIDE ION
lig 43
HEX
B
3901 6HEXANE
lig 44
HEX
B
3902 6HEXANE
lig 45
HEX
B
3903 6HEXANE
lig 46
PIO
D
3901 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 47
HEX
D
3902 6HEXANE
lig 48
HEX
D
3903 6HEXANE
lig 49
CL
D
3904 1CHLORIDE ION
lig 50
D10
E
501 10DECANE
lig 51
ABU
E
502 7GAMMA-AMINO-BUTANOIC ACID
lig 52
HEX
E
503 6HEXANE
lig 53
HEX
E
504 6HEXANE
lig 54
PLM
C
501 14PALMITIC ACID
lig 55
CLR
C
502 28CHOLESTEROL
lig 56
PGW
L
301 51 OCTADEC-9-ENOATE
lig 57
PGW
L
302 51 OCTADEC-9-ENOATE
lig 58
CL
L
303 1CHLORIDE ION