Analysis of Ligand-Protein Contacts in PDB entry:
9FAP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 55 ligands in PDB entry 9FAP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
P1L
C
380 23S-PALMITOYL-L-CYSTEINE
lig 2
P1L
C
381 23S-PALMITOYL-L-CYSTEINE
lig 3
P1L
C
385 23S-PALMITOYL-L-CYSTEINE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
F
9 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
10 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
I
5 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
I
6 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
J
3 11BETA-D-MANNOPYRANOSE
lig 23
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
M
6 11ALPHA-D-MANNOPYRANOSE
lig 33
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 36
PIO
A
3901 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 37
PGW
A
3902 51 OCTADEC-9-ENOATE
lig 38
PX2
B
501 361,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE
lig 39
PLM
B
502 18PALMITIC ACID
lig 40
NAG
C
501 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
PLM
C
502 14PALMITIC ACID
lig 42
CLR
C
503 28CHOLESTEROL
lig 43
D10
C
504 10DECANE
lig 44
PLM
C
505 18PALMITIC ACID
lig 45
PIO
D
3901 47 PHOSPHORYL]OXY-PROPYL] OCTANOATE
lig 46
HEX
D
3902 6HEXANE
lig 47
PGW
D
3903 51 OCTADEC-9-ENOATE
lig 48
PLM
D
3904 18PALMITIC ACID
lig 49
HEX
D
3905 6HEXANE
lig 50
PGW
D
3906 32 OCTADEC-9-ENOATE
lig 51
PLM
E
4401 18PALMITIC ACID
lig 52
PGW
L
301 51 OCTADEC-9-ENOATE
lig 53
PGW
L
302 51 OCTADEC-9-ENOATE
lig 54
CL
L
303 1CHLORIDE ION
lig 55
PX2
L
304 361,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE