Analysis of Ligand-Protein Contacts in PDB entry:
9FYX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 16 ligands in PDB entry 9FYX. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
3007 10PHOSPHOSERINE
lig 2
SEP
A
3021 10PHOSPHOSERINE
lig 3
ZN
I
201 1ZINC ION
lig 4
ZN
I
202 1ZINC ION
lig 5
ZN
J
101 1ZINC ION
lig 6
ZN
L
101 1ZINC ION
lig 7
G1G
P
101 53 GUANOSINE
lig 8
ZN
Y
201 1ZINC ION
lig 9
ZN
A
4001 1ZINC ION
lig 10
ZN
A
4002 1ZINC ION
lig 11
MG
A
4003 1MAGNESIUM ION
lig 12
ZN
B
1201 1ZINC ION
lig 13
ZN
C
301 1ZINC ION
lig 14
MG
a
1001 1MAGNESIUM ION
lig 15
PO4
a
1002 5PHOSPHATE ION
lig 16
PO4
c
801 5PHOSPHATE ION