Analysis of Ligand-Protein Contacts in PDB entry:
9G83


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 9G83. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
65 13N3, N4-DIMETHYLARGININE
lig 3
FME
J
1 10N-FORMYLMETHIONINE
lig 4
FME
L
1 10N-FORMYLMETHIONINE
lig 5
FME
M
1 10N-FORMYLMETHIONINE
lig 6
FME
q
1 10N-FORMYLMETHIONINE
lig 7
SF4
B
1001 8IRON/SULFUR CLUSTER
lig 8
NA
D
501 1SODIUM ION
lig 9
FES
E
401 4FE2/S2 (INORGANIC) CLUSTER
lig 10
SF4
F
501 8IRON/SULFUR CLUSTER
lig 11
FMN
F
502 31FLAVIN MONONUCLEOTIDE
lig 12
SF4
G
701 8IRON/SULFUR CLUSTER
lig 13
SF4
G
702 8IRON/SULFUR CLUSTER
lig 14
FES
G
703 4FE2/S2 (INORGANIC) CLUSTER
lig 15
DU0
H
401 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 16
U10
H
402 63UBIQUINONE-10
lig 17
SF4
I
1001 8IRON/SULFUR CLUSTER
lig 18
SF4
I
1002 8IRON/SULFUR CLUSTER
lig 19
DU0
N
501 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 20
ZN
R
101 1ZINC ION
lig 21
CDL
a
501 100CARDIOLIPIN
lig 22
U10
a
502 63UBIQUINONE-10
lig 23
HEM
a
503 43PROTOPORPHYRIN IX CONTAINING FE
lig 24
U10
a
504 63UBIQUINONE-10
lig 25
HEM
a
505 43PROTOPORPHYRIN IX CONTAINING FE
lig 26
CA
b
501 1CALCIUM ION
lig 27
HEC
b
502 43HEME C
lig 28
FES
c
1000 4FE2/S2 (INORGANIC) CLUSTER
lig 29
U10
d
501 63UBIQUINONE-10
lig 30
HEM
d
502 43PROTOPORPHYRIN IX CONTAINING FE
lig 31
HEM
d
503 43PROTOPORPHYRIN IX CONTAINING FE
lig 32
U10
d
504 63UBIQUINONE-10
lig 33
CA
e
501 1CALCIUM ION
lig 34
HEC
e
502 43HEME C
lig 35
DU0
f
201 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 36
FES
f
202 4FE2/S2 (INORGANIC) CLUSTER
lig 37
CA
g
601 1CALCIUM ION
lig 38
HEA
g
602 60HEME-A
lig 39
HEA
g
603 60HEME-A
lig 40
CU
g
604 1COPPER (II) ION
lig 41
MN
g
605 1MANGANESE (II) ION
lig 42
CUA
h
301 2DINUCLEAR COPPER ION
lig 43
HEA
k
601 60HEME-A
lig 44
HEA
k
602 60HEME-A
lig 45
CU
k
603 1COPPER (II) ION
lig 46
CA
k
604 1CALCIUM ION
lig 47
CUA
l
301 2DINUCLEAR COPPER ION
lig 48
CU
t
601 1COPPER (II) ION