Analysis of Ligand-Protein Contacts in PDB entry:
9G9Z


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 87 ligands in PDB entry 9G9Z. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
65 13N3, N4-DIMETHYLARGININE
lig 3
FME
J
1 10N-FORMYLMETHIONINE
lig 4
FME
L
1 10N-FORMYLMETHIONINE
lig 5
FME
M
1 10N-FORMYLMETHIONINE
lig 6
FME
q
1 10N-FORMYLMETHIONINE
lig 7
PGT
A
1001 51 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 8
DU0
A
1002 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 9
PGT
A
1003 51 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 10
SF4
B
1001 8IRON/SULFUR CLUSTER
lig 11
U10
B
1002 63UBIQUINONE-10
lig 12
CA
D
501 1CALCIUM ION
lig 13
PC1
D
502 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 14
FES
E
401 4FE2/S2 (INORGANIC) CLUSTER
lig 15
SF4
F
501 8IRON/SULFUR CLUSTER
lig 16
FMN
F
502 31FLAVIN MONONUCLEOTIDE
lig 17
FES
G
701 4FE2/S2 (INORGANIC) CLUSTER
lig 18
SF4
G
702 8IRON/SULFUR CLUSTER
lig 19
SF4
G
703 8IRON/SULFUR CLUSTER
lig 20
DU0
H
401 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 21
3PE
H
402 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 22
PC1
H
403 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 23
SF4
I
201 8IRON/SULFUR CLUSTER
lig 24
SF4
I
202 8IRON/SULFUR CLUSTER
lig 25
3PE
I
203 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 26
T7X
J
201 61PHOSPHATIDYLINOSITOL
lig 27
DU0
J
202 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 28
PGT
J
203 51 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 29
DU0
J
204 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 30
3PE
L
801 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 31
PC1
L
802 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 32
P5S
L
803 54 PROPYL]OXY}(HYDROXY)PHOSPHORYL]-L-SERINE
lig 33
PGT
L
804 51 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 34
3PH
L
805 481,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 35
3PH
L
806 481,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 36
3PH
M
2001 481,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 37
DU0
M
2002 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 38
PC1
M
2003 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 39
DU0
M
2004 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 40
PC1
M
2005 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 41
PGT
P
401 51 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E
lig 42
ZN
R
101 1ZINC ION
lig 43
PC1
a
501 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 44
PC1
a
502 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 45
3PH
a
503 481,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 46
PC1
a
504 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 47
HEM
a
505 43PROTOPORPHYRIN IX CONTAINING FE
lig 48
U10
a
506 63UBIQUINONE-10
lig 49
HEM
a
507 43PROTOPORPHYRIN IX CONTAINING FE
lig 50
U10
a
508 63UBIQUINONE-10
lig 51
PC1
a
509 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 52
3PE
b
501 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 53
HEC
b
502 43HEME C
lig 54
CA
b
503 1CALCIUM ION
lig 55
3PE
c
201 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 56
DU0
c
202 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 57
FES
c
203 4FE2/S2 (INORGANIC) CLUSTER
lig 58
DU0
c
204 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 59
3PH
c
205 481,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 60
CDL
d
501 100CARDIOLIPIN
lig 61
HEM
d
502 43PROTOPORPHYRIN IX CONTAINING FE
lig 62
HEM
d
503 43PROTOPORPHYRIN IX CONTAINING FE
lig 63
U10
d
504 63UBIQUINONE-10
lig 64
3PE
d
505 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 65
U10
d
506 63UBIQUINONE-10
lig 66
PC1
d
507 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 67
CA
e
501 1CALCIUM ION
lig 68
HEC
e
502 43HEME C
lig 69
FES
f
201 4FE2/S2 (INORGANIC) CLUSTER
lig 70
3PH
f
202 481,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 71
HEA
g
601 60HEME-A
lig 72
CU
g
602 1COPPER (II) ION
lig 73
CA
g
603 1CALCIUM ION
lig 74
HEA
g
604 60HEME-A
lig 75
MN
g
605 1MANGANESE (II) ION
lig 76
CUA
h
301 2DINUCLEAR COPPER ION
lig 77
PC1
i
1001 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 78
ZN
i
1002 1ZINC ION
lig 79
PC1
i
1003 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 80
3PE
i
1004 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 81
PC1
i
1005 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 82
PC1
i
1006 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 83
3PE
i
1007 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 84
DU0
i
1008 37 YL]OXYETHYL]PROPANE-1,3-DIOL
lig 85
3PH
i
1009 481,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 86
PC1
j
1001 541,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 87
PGT
q
1000 51 PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]E