Analysis of Ligand-Protein Contacts in PDB entry:
9GDM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 9GDM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
7GU
A
1 197-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
lig 2
7GU
A
2 227-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
lig 3
7DA
A
3 217-DEAZA-2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
lig 4
7GU
A
7 227-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
lig 5
7DA
A
8 217-DEAZA-2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
lig 6
7GU
A
9 227-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
lig 7
7GU
B
13 197-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
lig 8
7GU
B
14 227-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
lig 9
7DA
B
15 217-DEAZA-2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
lig 10
7GU
B
19 227-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
lig 11
7DA
B
20 217-DEAZA-2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
lig 12
7GU
B
21 227-DEAZA-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
lig 13
AG
A
101 1SILVER ION
lig 14
AG
A
102 1SILVER ION
lig 15
AG
A
103 1SILVER ION
lig 16
AG
A
104 1SILVER ION
lig 17
AG
A
105 1SILVER ION
lig 18
AG
A
106 1SILVER ION
lig 19
AG
A
107 1SILVER ION
lig 20
AG
B
101 1SILVER ION
lig 21
AG
B
102 1SILVER ION
lig 22
AG
B
103 1SILVER ION
lig 23
AG
B
104 1SILVER ION
lig 24
AG
B
105 1SILVER ION