Analysis of Ligand-Protein Contacts in PDB entry:
9GER


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 9GER. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 6
FUC
O
6 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 12
FUC
P
6 10ALPHA-L-FUCOPYRANOSE
lig 13
CL
K
201 1CHLORIDE ION
lig 14
HEM
K
202 43PROTOPORPHYRIN IX CONTAINING FE
lig 15
NAG
L
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
L
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
CA
L
603 1CALCIUM ION
lig 18
HEM
M
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 19
NAG
N
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
N
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE