Analysis of Ligand-Protein Contacts in PDB entry:
9GF3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 50 ligands in PDB entry 9GF3. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
M
0 3ACETYL GROUP
lig 2
ACE
N
0 3ACETYL GROUP
lig 3
ACE
C
0 3ACETYL GROUP
lig 4
NH2
C
35 1AMINO GROUP
lig 5
ACE
D
0 3ACETYL GROUP
lig 6
NH2
D
35 1AMINO GROUP
lig 7
ACE
E
0 3ACETYL GROUP
lig 8
NH2
E
35 1AMINO GROUP
lig 9
ACE
F
0 3ACETYL GROUP
lig 10
NH2
F
35 1AMINO GROUP
lig 11
ACE
G
0 3ACETYL GROUP
lig 12
NH2
G
35 1AMINO GROUP
lig 13
ACE
H
0 3ACETYL GROUP
lig 14
NH2
H
35 1AMINO GROUP
lig 15
ACE
I
0 3ACETYL GROUP
lig 16
NH2
I
35 1AMINO GROUP
lig 17
ACE
J
0 3ACETYL GROUP
lig 18
NH2
J
35 1AMINO GROUP
lig 19
ACE
K
0 3ACETYL GROUP
lig 20
NH2
K
35 1AMINO GROUP
lig 21
ACE
L
0 3ACETYL GROUP
lig 22
NH2
L
35 1AMINO GROUP
lig 23
ACE
A
0 3ACETYL GROUP
lig 24
NH2
A
35 1AMINO GROUP
lig 25
ACE
B
0 3ACETYL GROUP
lig 26
NH2
B
35 1AMINO GROUP
lig 27
FMT
N
101 3FORMIC ACID
lig 28
NA
C
101 1SODIUM ION
lig 29
GOL
D
101 6GLYCEROL
lig 30
FMT
E
101 3FORMIC ACID
lig 31
NH4
E
102 1AMMONIUM ION
lig 32
GOL
F
101 6GLYCEROL
lig 33
NA
F
102 1SODIUM ION
lig 34
GOL
G
101 6GLYCEROL
lig 35
GOL
G
102 6GLYCEROL
lig 36
NA
G
103 1SODIUM ION
lig 37
FMT
G
104 3FORMIC ACID
lig 38
FMT
H
101 3FORMIC ACID
lig 39
FMT
H
102 3FORMIC ACID
lig 40
NH4
H
103 1AMMONIUM ION
lig 41
P33
H
104 223,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
lig 42
GOL
J
101 6GLYCEROL
lig 43
GOL
L
101 6GLYCEROL
lig 44
GOL
L
102 6GLYCEROL
lig 45
FMT
A
101 3FORMIC ACID
lig 46
FMT
A
102 3FORMIC ACID
lig 47
NA
B
101 1SODIUM ION
lig 48
FMT
B
102 3FORMIC ACID
lig 49
FMT
B
103 3FORMIC ACID
lig 50
P33
B
104 223,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL