Analysis of Ligand-Protein Contacts in PDB entry:
9GJ8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 64 ligands in PDB entry 9GJ8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FO4
C
201 32SPHINGOMYELIN
lig 2
FO4
C
202 42SPHINGOMYELIN
lig 3
FO4
C
203 35SPHINGOMYELIN
lig 4
CLR
C
204 28CHOLESTEROL
lig 5
CLR
C
205 28CHOLESTEROL
lig 6
CLR
C
206 28CHOLESTEROL
lig 7
CLR
C
207 28CHOLESTEROL
lig 8
FO4
A
701 52SPHINGOMYELIN
lig 9
FO4
A
702 52SPHINGOMYELIN
lig 10
FO4
A
703 32SPHINGOMYELIN
lig 11
FO4
A
704 42SPHINGOMYELIN
lig 12
FO4
A
705 35SPHINGOMYELIN
lig 13
CLR
A
706 28CHOLESTEROL
lig 14
CLR
A
707 28CHOLESTEROL
lig 15
CLR
A
708 28CHOLESTEROL
lig 16
CLR
A
709 28CHOLESTEROL
lig 17
FO4
B
701 52SPHINGOMYELIN
lig 18
FO4
B
702 32SPHINGOMYELIN
lig 19
FO4
B
703 42SPHINGOMYELIN
lig 20
FO4
B
704 35SPHINGOMYELIN
lig 21
CLR
B
705 28CHOLESTEROL
lig 22
CLR
B
706 28CHOLESTEROL
lig 23
CLR
B
707 28CHOLESTEROL
lig 24
CLR
B
708 28CHOLESTEROL
lig 25
FO4
E
701 52SPHINGOMYELIN
lig 26
FO4
E
702 32SPHINGOMYELIN
lig 27
FO4
E
703 42SPHINGOMYELIN
lig 28
FO4
E
704 35SPHINGOMYELIN
lig 29
CLR
E
705 28CHOLESTEROL
lig 30
CLR
E
706 28CHOLESTEROL
lig 31
CLR
E
707 28CHOLESTEROL
lig 32
CLR
E
708 28CHOLESTEROL
lig 33
FO4
G
701 52SPHINGOMYELIN
lig 34
FO4
G
702 32SPHINGOMYELIN
lig 35
FO4
G
703 42SPHINGOMYELIN
lig 36
FO4
G
704 35SPHINGOMYELIN
lig 37
CLR
G
705 28CHOLESTEROL
lig 38
CLR
G
706 28CHOLESTEROL
lig 39
CLR
G
707 28CHOLESTEROL
lig 40
CLR
G
708 28CHOLESTEROL
lig 41
FO4
I
701 52SPHINGOMYELIN
lig 42
FO4
I
702 32SPHINGOMYELIN
lig 43
FO4
I
703 42SPHINGOMYELIN
lig 44
FO4
I
704 35SPHINGOMYELIN
lig 45
CLR
I
705 28CHOLESTEROL
lig 46
CLR
I
706 28CHOLESTEROL
lig 47
CLR
I
707 28CHOLESTEROL
lig 48
CLR
I
708 28CHOLESTEROL
lig 49
FO4
J
701 52SPHINGOMYELIN
lig 50
FO4
J
702 32SPHINGOMYELIN
lig 51
FO4
J
703 42SPHINGOMYELIN
lig 52
FO4
J
704 35SPHINGOMYELIN
lig 53
CLR
J
705 28CHOLESTEROL
lig 54
CLR
J
706 28CHOLESTEROL
lig 55
CLR
J
707 28CHOLESTEROL
lig 56
CLR
J
708 28CHOLESTEROL
lig 57
FO4
L
701 52SPHINGOMYELIN
lig 58
FO4
L
702 32SPHINGOMYELIN
lig 59
FO4
L
703 42SPHINGOMYELIN
lig 60
FO4
L
704 35SPHINGOMYELIN
lig 61
CLR
L
705 28CHOLESTEROL
lig 62
CLR
L
706 28CHOLESTEROL
lig 63
CLR
L
707 28CHOLESTEROL
lig 64
CLR
L
708 28CHOLESTEROL