Analysis of Ligand-Protein Contacts in PDB entry:
9GKL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 104 ligands in PDB entry 9GKL. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FO4
U
201 42SPHINGOMYELIN
lig 2
FO4
U
202 35SPHINGOMYELIN
lig 3
FO4
U
203 33SPHINGOMYELIN
lig 4
FO4
U
204 18SPHINGOMYELIN
lig 5
FO4
U
205 14SPHINGOMYELIN
lig 6
FO4
U
206 33SPHINGOMYELIN
lig 7
CLR
U
207 28CHOLESTEROL
lig 8
CLR
U
208 28CHOLESTEROL
lig 9
CLR
U
209 28CHOLESTEROL
lig 10
CLR
U
210 28CHOLESTEROL
lig 11
FO4
U
211 52SPHINGOMYELIN
lig 12
FO4
U
212 38SPHINGOMYELIN
lig 13
FO4
A
201 38SPHINGOMYELIN
lig 14
FO4
A
202 42SPHINGOMYELIN
lig 15
FO4
A
203 35SPHINGOMYELIN
lig 16
FO4
A
204 38SPHINGOMYELIN
lig 17
FO4
A
205 33SPHINGOMYELIN
lig 18
FO4
A
206 18SPHINGOMYELIN
lig 19
FO4
A
207 14SPHINGOMYELIN
lig 20
FO4
A
208 33SPHINGOMYELIN
lig 21
CLR
A
209 28CHOLESTEROL
lig 22
CLR
A
210 28CHOLESTEROL
lig 23
CLR
A
211 28CHOLESTEROL
lig 24
CLR
A
212 28CHOLESTEROL
lig 25
FO4
A
213 52SPHINGOMYELIN
lig 26
FO4
A
214 38SPHINGOMYELIN
lig 27
FO4
B
201 42SPHINGOMYELIN
lig 28
FO4
B
202 35SPHINGOMYELIN
lig 29
FO4
B
203 38SPHINGOMYELIN
lig 30
FO4
B
204 33SPHINGOMYELIN
lig 31
FO4
B
205 18SPHINGOMYELIN
lig 32
FO4
B
206 14SPHINGOMYELIN
lig 33
FO4
B
207 33SPHINGOMYELIN
lig 34
CLR
B
208 28CHOLESTEROL
lig 35
CLR
B
209 28CHOLESTEROL
lig 36
CLR
B
210 28CHOLESTEROL
lig 37
CLR
B
211 28CHOLESTEROL
lig 38
FO4
B
212 52SPHINGOMYELIN
lig 39
FO4
B
213 38SPHINGOMYELIN
lig 40
FO4
C
201 42SPHINGOMYELIN
lig 41
FO4
C
202 35SPHINGOMYELIN
lig 42
FO4
C
203 38SPHINGOMYELIN
lig 43
FO4
C
204 33SPHINGOMYELIN
lig 44
FO4
C
205 18SPHINGOMYELIN
lig 45
FO4
C
206 14SPHINGOMYELIN
lig 46
FO4
C
207 33SPHINGOMYELIN
lig 47
CLR
C
208 28CHOLESTEROL
lig 48
CLR
C
209 28CHOLESTEROL
lig 49
CLR
C
210 28CHOLESTEROL
lig 50
CLR
C
211 28CHOLESTEROL
lig 51
FO4
C
212 52SPHINGOMYELIN
lig 52
FO4
C
213 38SPHINGOMYELIN
lig 53
FO4
D
201 42SPHINGOMYELIN
lig 54
FO4
D
202 35SPHINGOMYELIN
lig 55
FO4
D
203 38SPHINGOMYELIN
lig 56
FO4
D
204 33SPHINGOMYELIN
lig 57
FO4
D
205 18SPHINGOMYELIN
lig 58
FO4
D
206 14SPHINGOMYELIN
lig 59
FO4
D
207 33SPHINGOMYELIN
lig 60
CLR
D
208 28CHOLESTEROL
lig 61
CLR
D
209 28CHOLESTEROL
lig 62
CLR
D
210 28CHOLESTEROL
lig 63
CLR
D
211 28CHOLESTEROL
lig 64
FO4
D
212 52SPHINGOMYELIN
lig 65
FO4
D
213 38SPHINGOMYELIN
lig 66
FO4
E
201 42SPHINGOMYELIN
lig 67
FO4
E
202 35SPHINGOMYELIN
lig 68
FO4
E
203 38SPHINGOMYELIN
lig 69
FO4
E
204 33SPHINGOMYELIN
lig 70
FO4
E
205 18SPHINGOMYELIN
lig 71
FO4
E
206 14SPHINGOMYELIN
lig 72
FO4
E
207 33SPHINGOMYELIN
lig 73
CLR
E
208 28CHOLESTEROL
lig 74
CLR
E
209 28CHOLESTEROL
lig 75
CLR
E
210 28CHOLESTEROL
lig 76
CLR
E
211 28CHOLESTEROL
lig 77
FO4
E
212 52SPHINGOMYELIN
lig 78
FO4
E
213 38SPHINGOMYELIN
lig 79
FO4
F
201 42SPHINGOMYELIN
lig 80
FO4
F
202 35SPHINGOMYELIN
lig 81
FO4
F
203 38SPHINGOMYELIN
lig 82
FO4
F
204 33SPHINGOMYELIN
lig 83
FO4
F
205 18SPHINGOMYELIN
lig 84
FO4
F
206 14SPHINGOMYELIN
lig 85
FO4
F
207 33SPHINGOMYELIN
lig 86
CLR
F
208 28CHOLESTEROL
lig 87
CLR
F
209 28CHOLESTEROL
lig 88
CLR
F
210 28CHOLESTEROL
lig 89
CLR
F
211 28CHOLESTEROL
lig 90
FO4
F
212 52SPHINGOMYELIN
lig 91
FO4
F
213 38SPHINGOMYELIN
lig 92
FO4
G
201 52SPHINGOMYELIN
lig 93
FO4
G
202 42SPHINGOMYELIN
lig 94
FO4
G
203 35SPHINGOMYELIN
lig 95
FO4
G
204 38SPHINGOMYELIN
lig 96
FO4
G
205 33SPHINGOMYELIN
lig 97
FO4
G
206 18SPHINGOMYELIN
lig 98
FO4
G
207 14SPHINGOMYELIN
lig 99
FO4
G
208 33SPHINGOMYELIN
lig 100
CLR
G
209 28CHOLESTEROL
lig 101
CLR
G
210 28CHOLESTEROL
lig 102
CLR
G
211 28CHOLESTEROL
lig 103
CLR
G
212 28CHOLESTEROL
lig 104
FO4
G
213 38SPHINGOMYELIN