Analysis of Ligand-Protein Contacts in PDB entry:
9II2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 20 ligands in PDB entry 9II2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
R
856 5PHOSPHOSERINE
lig 2
SEP
R
857 10PHOSPHOSERINE
lig 3
SEP
R
859 10PHOSPHOSERINE
lig 4
TPO
R
860 11PHOSPHOTHREONINE
lig 5
SEP
B
856 5PHOSPHOSERINE
lig 6
SEP
B
857 10PHOSPHOSERINE
lig 7
SEP
B
859 10PHOSPHOSERINE
lig 8
TPO
B
860 11PHOSPHOTHREONINE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
GLU
R
1001 9GLUTAMIC ACID
lig 14
CLR
R
1002 28CHOLESTEROL
lig 15
CLR
R
1003 28CHOLESTEROL
lig 16
CLR
R
1004 28CHOLESTEROL
lig 17
GLU
B
1001 9GLUTAMIC ACID
lig 18
CLR
B
1002 28CHOLESTEROL
lig 19
CLR
B
1003 28CHOLESTEROL
lig 20
CLR
B
1004 28CHOLESTEROL